PuLP==2.7.0
PyYAML>=6.0
beautifulsoup4>=4.11.1
biopython
numpy>=1.26.4
pandas>=2.1.0
pysam==0.23.3
nanofilt==2.8.0
snakemake==7.18.2
yattag>=1.14.0
pydantic==2.12.5
humanize==4.15.0
click==8.3.1
bs4==0.0.2
screed==1.1.2
