LICENSE
MANIFEST.in
README.md
pyproject.toml
setup.py
docs/graphical_abstract.svg
docs/plasrisk_workflow.html
docs/plasrisk_workflow.svg
plasrisk/__init__.py
plasrisk/__main__.py
plasrisk/annotate.py
plasrisk/cli.py
plasrisk/extract.py
plasrisk/fragment_sim.py
plasrisk/lookup.py
plasrisk/metagenome.py
plasrisk/scoring.py
plasrisk.egg-info/PKG-INFO
plasrisk.egg-info/SOURCES.txt
plasrisk.egg-info/dependency_links.txt
plasrisk.egg-info/entry_points.txt
plasrisk.egg-info/requires.txt
plasrisk.egg-info/top_level.txt
plasrisk/data/replicon_lookup.csv
tests/test_auto.py
tests/test_extract.py
tests/test_metagenome.py
tests/test_plasmids.fasta
tests/test_scoring.py