README.md
pyproject.toml
prism/__init__.py
prism/baselines/__init__.py
prism/baselines/context_only.py
prism/baselines/latent_only.py
prism/baselines/nb_glm.py
prism/baselines/nebula_baseline.py
prism/baselines/pseudobulk.py
prism/baselines/r_baselines.py
prism/baselines/stratified.py
prism/baselines/twostage.py
prism/data/__init__.py
prism/data/dataset.py
prism/data/misspecified.py
prism/data/rosmap.py
prism/data/simulation.py
prism/evaluation/__init__.py
prism/evaluation/metrics.py
prism/evaluation/plotting.py
prism/inference/__init__.py
prism/inference/e_step.py
prism/inference/em_loop.py
prism/inference/m_step.py
prism/inference/score_test.py
prism/inference/wald_test.py
prism/model/__init__.py
prism/model/encoders.py
prism/model/hl_likelihood.py
prism/model/nb_likelihood.py
prism/model/prism_model.py
prism/model/random_effects.py
prism/utils/__init__.py
prism/utils/logging.py
prism/utils/numerical.py
prism/utils/q_prior.py
prism_de.egg-info/PKG-INFO
prism_de.egg-info/SOURCES.txt
prism_de.egg-info/dependency_links.txt
prism_de.egg-info/requires.txt
prism_de.egg-info/top_level.txt
tests/test_data.py
tests/test_e_step.py
tests/test_em_convergence.py
tests/test_evaluation.py
tests/test_hl_likelihood.py
tests/test_identifiability.py
tests/test_inference.py
tests/test_m_step.py
tests/test_model.py
tests/test_nb_likelihood.py
tests/test_utils.py