pydantic==2.*
ga4gh.vrs<3.0,>=2.3.0
biocommons.seqrepo
gene-normalizer~=0.11.3
civicpy~=5.4.0
cool-seq-tool~=0.16.0

[dev]
prek>=0.2.23
ruff==0.14.10

[docs]
sphinx<8.2.0,>=7.2
sphinx-autodoc-typehints==1.22.0
sphinx-autobuild==2021.3.14
sphinx-copybutton==0.5.2
sphinxext-opengraph==0.8.2
furo>=2023.9.10
sphinx-github-changelog==1.2.1

[notebooks]
ipykernel
jupyter
seaborn>=0.12.0

[tests]
pytest
pytest-cov
pytest-asyncio
pyyaml
