{% for key, val in (patient_summary | default(patient_info)).items() %}
{{ key }}
{{ val }}
{% endfor %}
{% if input_coverage %}{% include "templates/input_coverage.html" %}{% endif %}
{% include "templates/products.html" %}
{% if ranked_candidates is defined %}{% include "templates/ranking.html" %}{% endif %}
{% if input_coverage %}{% include "templates/source_outcomes.html" %}{% endif %}
{% if candidate_details | default(true) and variants %}
{% include "templates/candidate_details.html" %}
{% endif %}
{% include "templates/score_guide.html" %}
Methods and provenance
{% include "templates/source_directory.html" %}
{% include "templates/prediction_models.html" %}
{% if input_coverage %}{% include "templates/input_lineage.html" %}{% endif %}
{% for key, val in patient_info.items() %}
{{ key | e }}
{{ val | e }}
{% endfor %}
{% if prediction_configuration %}
Effective prediction configuration
{% for stage in prediction_configuration %}
{{ stage.stage }}: {{ stage.status }}
{% for detail in stage.details %}
{{ detail }}
{% endfor %}
{% endfor %}
{% endif %}
COMMAND LINE ARGUMENTS
{% for key, val in args %}
{{ key }}
{{ val }}
{% endfor %}
{% if input_json_file %}
Report generated from saved location: {{ input_json_file }}