milume

milume

A thinking surface for spatial omics.

Layer images, cells, and transcripts in one reactive notebook widget.

pip install milume
Docs Open demo

Try a demo

LandmarksWidget

Lasso, rectangle, ellipse; point, line, spline, shape. Color by category or gene. Neighbor expand runs in the browser. Read selections back with get_obs_names.

LandmarksWidget on colon A2 with clustered cells and drawn landmarks

Quickstart · API reference · Source on GitHub