# HPVsim-generated files
*.obj
*.png
files/

# Quarto
_freeze/
_inv/
api/
.jupyter_cache/

# Regression baselines (local-only artifacts)
tests/regression_baselines/

# Diagnostic outputs from regression instrumentation
# (multi-seed JSONs incl. seeds/trajectories, per-step traces, profiling reports)
tests/regression/v[23]_*.json
tests/regression/v[23]_trace*.csv
tests/regression/profile_v3_anchor*
tests/regression/perf_parity_*.json

# Stale legacy regression artifact
hpvsim/regression/

# Other files
.idea
.vscode
.DS_Store
.claude/

# Calibration artifacts emitted by tests
tests/hpvsim_calib_*.db
# Calibration / Optuna sqlite DBs anywhere (e.g. repo-root scratch dbs)
*.db

# uv lockfile (hpvsim is a library, not an app)
uv.lock


# Byte-compiled / optimized / DLL files
__pycache__/
*.py[cod]
*$py.class

# C extensions
*.so

# Distribution / packaging
.Python
build/
develop-eggs/
dist/
downloads/
eggs/
.eggs/
lib/
lib64/
parts/
sdist/
var/
wheels/
pip-wheel-metadata/
share/python-wheels/
*.egg-info/
.installed.cfg
*.egg
MANIFEST

# PyInstaller
#  Usually these files are written by a python script from a template
#  before PyInstaller builds the exe, so as to inject date/other infos into it.
*.manifest
*.spec

# Installer logs
pip-log.txt
pip-delete-this-directory.txt

# Unit test / coverage reports
htmlcov/
.tox/
.nox/
.coverage
.coverage.*
.cache
nosetests.xml
coverage.xml
*.cover
*.py,cover
.hypothesis/
.pytest_cache/

# Translations
*.mo
*.pot

# Django stuff:
*.log
local_settings.py
db.sqlite3
db.sqlite3-journal

# Flask stuff:
instance/
.webassets-cache
*.out

# Scrapy stuff:
.scrapy

# Sphinx (legacy) / Quarto documentation
docs/_build/
docs/api/_autosummary
docs/_site/
objects.json

# PyBuilder
target/

# Jupyter Notebook
.ipynb_checkpoints

# IPython
profile_default/
ipython_config.py

# pyenv
.python-version

# pipenv
#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
#   However, in case of collaboration, if having platform-specific dependencies or dependencies
#   having no cross-platform support, pipenv may install dependencies that don't work, or not
#   install all needed dependencies.
#Pipfile.lock

# PEP 582; used by e.g. github.com/David-OConnor/pyflow
__pypackages__/

# Celery stuff
celerybeat-schedule
celerybeat.pid

# SageMath parsed files
*.sage.py

# Environments
.env
.venv
env/
venv/
ENV/
env.bak/
venv.bak/

# Spyder project settings
.spyderproject
.spyproject

# Rope project settings
.ropeproject

# mkdocs documentation
/site

# mypy
.mypy_cache/
.dmypy.json
dmypy.json

# Pyre type checker
.pyre/

# Node.js and NPM
node_modules

