CODE_OF_CONDUCT.md
LICENSE
MANIFEST.in
README.md
setup.cfg
setup.py
versioneer.py
PyMEMENTO/__init__.py
PyMEMENTO/_version.py
PyMEMENTO/gmx_util.py
PyMEMENTO/mc_path_sampling.py
PyMEMENTO/modeller_util.py
PyMEMENTO/pdb_util.py
PyMEMENTO/plumed_util.py
PyMEMENTO/pymemento.py
PyMEMENTO.egg-info/PKG-INFO
PyMEMENTO.egg-info/SOURCES.txt
PyMEMENTO.egg-info/dependency_links.txt
PyMEMENTO.egg-info/requires.txt
PyMEMENTO.egg-info/top_level.txt
PyMEMENTO/data/README.md
PyMEMENTO/data/termini_ref.pdb
PyMEMENTO/data/termini_ref_proline.pdb
PyMEMENTO/data/amber14sb.ff/Makefile.am
PyMEMENTO/data/amber14sb.ff/Makefile.in
PyMEMENTO/data/amber14sb.ff/aminoacids.arn
PyMEMENTO/data/amber14sb.ff/aminoacids.c.tdb
PyMEMENTO/data/amber14sb.ff/aminoacids.hdb
PyMEMENTO/data/amber14sb.ff/aminoacids.n.tdb
PyMEMENTO/data/amber14sb.ff/aminoacids.r2b
PyMEMENTO/data/amber14sb.ff/aminoacids.rtp
PyMEMENTO/data/amber14sb.ff/aminoacids.vsd
PyMEMENTO/data/amber14sb.ff/atomtypes.atp
PyMEMENTO/data/amber14sb.ff/dna.arn
PyMEMENTO/data/amber14sb.ff/dna.hdb
PyMEMENTO/data/amber14sb.ff/dna.r2b
PyMEMENTO/data/amber14sb.ff/dna.rtp
PyMEMENTO/data/amber14sb.ff/ffbonded.itp
PyMEMENTO/data/amber14sb.ff/ffnonbonded.itp
PyMEMENTO/data/amber14sb.ff/forcefield.doc
PyMEMENTO/data/amber14sb.ff/forcefield.itp
PyMEMENTO/data/amber14sb.ff/gbsa.itp
PyMEMENTO/data/amber14sb.ff/ions.itp
PyMEMENTO/data/amber14sb.ff/rna.arn
PyMEMENTO/data/amber14sb.ff/rna.hdb
PyMEMENTO/data/amber14sb.ff/rna.r2b
PyMEMENTO/data/amber14sb.ff/rna.rtp
PyMEMENTO/data/amber14sb.ff/spc.itp
PyMEMENTO/data/amber14sb.ff/spce.itp
PyMEMENTO/data/amber14sb.ff/tip3p.itp
PyMEMENTO/data/amber14sb.ff/tip4p.itp
PyMEMENTO/data/amber14sb.ff/tip4pew.itp
PyMEMENTO/data/amber14sb.ff/tip5p.itp
PyMEMENTO/data/amber14sb.ff/urea.itp
PyMEMENTO/data/amber14sb.ff/watermodels.dat
PyMEMENTO/data/charmm36-jul2021.ff/aminoacids.arn
PyMEMENTO/data/charmm36-jul2021.ff/aminoacids.c.tdb
PyMEMENTO/data/charmm36-jul2021.ff/aminoacids.hdb
PyMEMENTO/data/charmm36-jul2021.ff/aminoacids.n.tdb
PyMEMENTO/data/charmm36-jul2021.ff/aminoacids.r2b
PyMEMENTO/data/charmm36-jul2021.ff/aminoacids.rtp
PyMEMENTO/data/charmm36-jul2021.ff/atomtypes.atp
PyMEMENTO/data/charmm36-jul2021.ff/carb.c.tdb
PyMEMENTO/data/charmm36-jul2021.ff/carb.hdb
PyMEMENTO/data/charmm36-jul2021.ff/carb.n.tdb
PyMEMENTO/data/charmm36-jul2021.ff/carb.r2b
PyMEMENTO/data/charmm36-jul2021.ff/carb.rtp
PyMEMENTO/data/charmm36-jul2021.ff/cgenff.c.tdb
PyMEMENTO/data/charmm36-jul2021.ff/cgenff.hdb
PyMEMENTO/data/charmm36-jul2021.ff/cgenff.n.tdb
PyMEMENTO/data/charmm36-jul2021.ff/cgenff.r2b
PyMEMENTO/data/charmm36-jul2021.ff/cgenff.rtp
PyMEMENTO/data/charmm36-jul2021.ff/cmap.itp
PyMEMENTO/data/charmm36-jul2021.ff/ethers.c.tdb
PyMEMENTO/data/charmm36-jul2021.ff/ethers.hdb
PyMEMENTO/data/charmm36-jul2021.ff/ethers.n.tdb
PyMEMENTO/data/charmm36-jul2021.ff/ethers.r2b
PyMEMENTO/data/charmm36-jul2021.ff/ethers.rtp
PyMEMENTO/data/charmm36-jul2021.ff/ffbonded.itp
PyMEMENTO/data/charmm36-jul2021.ff/ffmissingdihedrals.itp
PyMEMENTO/data/charmm36-jul2021.ff/ffnonbonded.itp
PyMEMENTO/data/charmm36-jul2021.ff/forcefield.doc
PyMEMENTO/data/charmm36-jul2021.ff/forcefield.itp
PyMEMENTO/data/charmm36-jul2021.ff/ions.itp
PyMEMENTO/data/charmm36-jul2021.ff/lipid.c.tdb
PyMEMENTO/data/charmm36-jul2021.ff/lipid.hdb
PyMEMENTO/data/charmm36-jul2021.ff/lipid.n.tdb
PyMEMENTO/data/charmm36-jul2021.ff/lipid.r2b
PyMEMENTO/data/charmm36-jul2021.ff/lipid.rtp
PyMEMENTO/data/charmm36-jul2021.ff/metals.c.tdb
PyMEMENTO/data/charmm36-jul2021.ff/metals.hdb
PyMEMENTO/data/charmm36-jul2021.ff/metals.n.tdb
PyMEMENTO/data/charmm36-jul2021.ff/metals.r2b
PyMEMENTO/data/charmm36-jul2021.ff/metals.rtp
PyMEMENTO/data/charmm36-jul2021.ff/na.c.tdb
PyMEMENTO/data/charmm36-jul2021.ff/na.hdb
PyMEMENTO/data/charmm36-jul2021.ff/na.n.tdb
PyMEMENTO/data/charmm36-jul2021.ff/na.r2b
PyMEMENTO/data/charmm36-jul2021.ff/na.rtp
PyMEMENTO/data/charmm36-jul2021.ff/nbfix.itp
PyMEMENTO/data/charmm36-jul2021.ff/silicates.c.tdb
PyMEMENTO/data/charmm36-jul2021.ff/silicates.hdb
PyMEMENTO/data/charmm36-jul2021.ff/silicates.n.tdb
PyMEMENTO/data/charmm36-jul2021.ff/silicates.r2b
PyMEMENTO/data/charmm36-jul2021.ff/silicates.rtp
PyMEMENTO/data/charmm36-jul2021.ff/solvent.c.tdb
PyMEMENTO/data/charmm36-jul2021.ff/solvent.hdb
PyMEMENTO/data/charmm36-jul2021.ff/solvent.n.tdb
PyMEMENTO/data/charmm36-jul2021.ff/solvent.r2b
PyMEMENTO/data/charmm36-jul2021.ff/solvent.rtp
PyMEMENTO/data/charmm36-jul2021.ff/spc.itp
PyMEMENTO/data/charmm36-jul2021.ff/spce.itp
PyMEMENTO/data/charmm36-jul2021.ff/tip3p.itp
PyMEMENTO/data/charmm36-jul2021.ff/tip3p_original.itp
PyMEMENTO/data/charmm36-jul2021.ff/tip4p.itp
PyMEMENTO/data/charmm36-jul2021.ff/tip4pew.itp
PyMEMENTO/data/charmm36-jul2021.ff/tip5p.itp
PyMEMENTO/data/charmm36-jul2021.ff/watermodels.dat
PyMEMENTO/data/forcefield.ff/atomtypes.atp
PyMEMENTO/data/forcefield.ff/ffbonded.itp
PyMEMENTO/data/forcefield.ff/ffnonbonded.itp
PyMEMENTO/data/forcefield.ff/ffnonbonded.itp~
PyMEMENTO/data/forcefield.ff/forcefield.doc
PyMEMENTO/data/forcefield.ff/forcefield.itp
PyMEMENTO/data/forcefield.ff/forcefield.itp~
PyMEMENTO/data/forcefield.ff/ions.itp
PyMEMENTO/data/forcefield.ff/lipids.rtp
PyMEMENTO/data/forcefield.ff/spc.itp
PyMEMENTO/data/forcefield.ff/spce.itp
PyMEMENTO/data/forcefield.ff/test.pdb
PyMEMENTO/data/forcefield.ff/tip3p.itp
PyMEMENTO/data/forcefield.ff/watermodels.dat
PyMEMENTO/data/template_nolipid_amber/minim.mdp
PyMEMENTO/data/template_nolipid_amber/npt.mdp
PyMEMENTO/data/template_nolipid_amber/nvt.mdp
PyMEMENTO/data/template_nolipid_amber/prod.mdp
PyMEMENTO/data/template_nolipid_amber/prod_sc.mdp
PyMEMENTO/data/template_nolipid_amber/sub_all
PyMEMENTO/data/template_nolipid_amber/template.top
PyMEMENTO/data/template_nolipid_charmm/minim.mdp
PyMEMENTO/data/template_nolipid_charmm/npt.mdp
PyMEMENTO/data/template_nolipid_charmm/nvt.mdp
PyMEMENTO/data/template_nolipid_charmm/prod.mdp
PyMEMENTO/data/template_nolipid_charmm/prod_sc.mdp
PyMEMENTO/data/template_nolipid_charmm/sub_all
PyMEMENTO/data/template_nolipid_charmm/template.top
PyMEMENTO/tests/__init__.py
PyMEMENTO/tests/conftest.py
PyMEMENTO/tests/test_PyMEMENTO.py
PyMEMENTO/tests/test_packages.py
PyMEMENTO/tests/test_data/ADK/holo_closed.gro
PyMEMENTO/tests/test_data/ADK/holo_open.gro
PyMEMENTO/tests/test_data/ADK/template_ADK_holo/gaff_atomtypes.itp
PyMEMENTO/tests/test_data/ADK/template_ADK_holo/ligand.itp
PyMEMENTO/tests/test_data/ADK/template_ADK_holo/minim.mdp
PyMEMENTO/tests/test_data/ADK/template_ADK_holo/npt.mdp
PyMEMENTO/tests/test_data/ADK/template_ADK_holo/nvt.mdp
PyMEMENTO/tests/test_data/ADK/template_ADK_holo/plumed_equil.dat
PyMEMENTO/tests/test_data/ADK/template_ADK_holo/prod.mdp
PyMEMENTO/tests/test_data/ADK/template_ADK_holo/prod_sc.mdp
PyMEMENTO/tests/test_data/ADK/template_ADK_holo/template.top
PyMEMENTO/tests/test_data/LEUT/if.gro
PyMEMENTO/tests/test_data/LEUT/occ.gro
PyMEMENTO/tests/test_data/decaalanine/extended.gro
PyMEMENTO/tests/test_data/decaalanine/extended_with_ligand.gro
PyMEMENTO/tests/test_data/decaalanine/extended_with_ligand_peptide.gro
PyMEMENTO/tests/test_data/decaalanine/helix.gro
PyMEMENTO/tests/test_data/decaalanine/helix_with_ligand.gro
PyMEMENTO/tests/test_data/decaalanine/helix_with_ligand_peptide.gro
PyMEMENTO/tests/test_data/decaalanine/ligand.gro
PyMEMENTO/tests/test_data/decaalanine/ligand_peptide.gro
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/Makefile.am
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/Makefile.in
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/aminoacids.arn
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/aminoacids.c.tdb
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/aminoacids.hdb
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/aminoacids.n.tdb
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/aminoacids.r2b
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/aminoacids.rtp
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/aminoacids.vsd
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/atomtypes.atp
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/dna.arn
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/dna.hdb
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/dna.r2b
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/dna.rtp
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/ffbonded.itp
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/ffnonbonded.itp
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/forcefield.doc
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/forcefield.itp
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/gbsa.itp
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/ions.itp
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/rna.arn
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/rna.hdb
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/rna.r2b
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/rna.rtp
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/spc.itp
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/spce.itp
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/tip3p.itp
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/tip4p.itp
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/tip4pew.itp
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/tip5p.itp
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/urea.itp
PyMEMENTO/tests/test_data/decaalanine/amber14sb.ff/watermodels.dat
PyMEMENTO/tests/test_data/decaalanine/equil_output/sim0/prod_sc.gro
PyMEMENTO/tests/test_data/decaalanine/equil_output/sim0/prod_sc.xtc
PyMEMENTO/tests/test_data/decaalanine/equil_output/sim1/prod_sc.gro
PyMEMENTO/tests/test_data/decaalanine/equil_output/sim1/prod_sc.xtc
PyMEMENTO/tests/test_data/decaalanine/equil_output/sim2/prod_sc.gro
PyMEMENTO/tests/test_data/decaalanine/equil_output/sim2/prod_sc.xtc
PyMEMENTO/tests/test_data/decaalanine/plumed_distance/plumed.dat
PyMEMENTO/tests/test_data/decaalanine/plumed_distance/plumed_monitor.dat
PyMEMENTO/tests/test_data/decaalanine/plumed_rmsd/plumed.dat
PyMEMENTO/tests/test_data/decaalanine/plumed_rmsd/plumed_monitor.dat
PyMEMENTO/tests/test_data/decaalanine/plumed_rmsd/ref_plumed.pdb
PyMEMENTO/tests/test_data/multichain/multi.gro
PyMEMENTO/tests/test_data/protonation_states_decaalanine/extended.gro
PyMEMENTO/tests/test_data/protonation_states_decaalanine/helix.gro
PyMEMENTO/tests/test_data/template_LEUT_if/POPE.itp
PyMEMENTO/tests/test_data/template_LEUT_if/minim.mdp
PyMEMENTO/tests/test_data/template_LEUT_if/npt.mdp
PyMEMENTO/tests/test_data/template_LEUT_if/nvt.mdp
PyMEMENTO/tests/test_data/template_LEUT_if/prod.mdp
PyMEMENTO/tests/test_data/template_LEUT_if/prod_sc.mdp
PyMEMENTO/tests/test_data/template_LEUT_if/template.top
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/aminoacids.arn
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/aminoacids.c.tdb
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/aminoacids.hdb
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/aminoacids.n.tdb
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/aminoacids.r2b
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/aminoacids.rtp
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/atomtypes.atp
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/carb.c.tdb
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/carb.hdb
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/carb.n.tdb
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/carb.r2b
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/carb.rtp
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/cgenff.c.tdb
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/cgenff.hdb
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/cgenff.n.tdb
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/cgenff.r2b
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/cgenff.rtp
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/cmap.itp
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/ethers.c.tdb
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/ethers.hdb
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/ethers.n.tdb
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/ethers.r2b
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/ethers.rtp
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/ffbonded.itp
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/ffmissingdihedrals.itp
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/ffnonbonded.itp
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/forcefield.doc
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/forcefield.itp
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/ions.itp
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/lipid.c.tdb
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/lipid.hdb
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/lipid.n.tdb
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/lipid.r2b
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/lipid.rtp
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/metals.c.tdb
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/metals.hdb
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/metals.n.tdb
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/metals.r2b
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/metals.rtp
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/na.c.tdb
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/na.hdb
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/na.n.tdb
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/na.r2b
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/na.rtp
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/nbfix.itp
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/silicates.c.tdb
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/silicates.hdb
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/silicates.n.tdb
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/silicates.r2b
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/silicates.rtp
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/solvent.c.tdb
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/solvent.hdb
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/solvent.n.tdb
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/solvent.r2b
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/solvent.rtp
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/spc.itp
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/spce.itp
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/tip3p.itp
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/tip3p_original.itp
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/tip4p.itp
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/tip4pew.itp
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/tip5p.itp
PyMEMENTO/tests/test_data/template_LEUT_if/charmm36-jul2021.ff/watermodels.dat
PyMEMENTO/tests/test_data/template_decaalanine_with_ligand/atomtypes.itp
PyMEMENTO/tests/test_data/template_decaalanine_with_ligand/ligand.gro
PyMEMENTO/tests/test_data/template_decaalanine_with_ligand/ligand.itp
PyMEMENTO/tests/test_data/template_decaalanine_with_ligand/minim.mdp
PyMEMENTO/tests/test_data/template_decaalanine_with_ligand/npt.mdp
PyMEMENTO/tests/test_data/template_decaalanine_with_ligand/nvt.mdp
PyMEMENTO/tests/test_data/template_decaalanine_with_ligand/prod.mdp
PyMEMENTO/tests/test_data/template_decaalanine_with_ligand/prod_sc.mdp
PyMEMENTO/tests/test_data/template_decaalanine_with_ligand/sub_all
PyMEMENTO/tests/test_data/template_decaalanine_with_ligand/template.top
PyMEMENTO/tests/test_data/template_decaalanine_with_ligand_peptide/ligand.gro
PyMEMENTO/tests/test_data/template_decaalanine_with_ligand_peptide/ligand.itp
PyMEMENTO/tests/test_data/template_decaalanine_with_ligand_peptide/minim.mdp
PyMEMENTO/tests/test_data/template_decaalanine_with_ligand_peptide/npt.mdp
PyMEMENTO/tests/test_data/template_decaalanine_with_ligand_peptide/nvt.mdp
PyMEMENTO/tests/test_data/template_decaalanine_with_ligand_peptide/prod.mdp
PyMEMENTO/tests/test_data/template_decaalanine_with_ligand_peptide/prod_sc.mdp
PyMEMENTO/tests/test_data/template_decaalanine_with_ligand_peptide/sub_all
PyMEMENTO/tests/test_data/template_decaalanine_with_ligand_peptide/template.top
PyMEMENTO/tests/test_data/template_multichain/minim.mdp
PyMEMENTO/tests/test_data/template_multichain/npt.mdp
PyMEMENTO/tests/test_data/template_multichain/nvt.mdp
PyMEMENTO/tests/test_data/template_multichain/prod.mdp
PyMEMENTO/tests/test_data/template_multichain/prod_sc.mdp
PyMEMENTO/tests/test_data/template_multichain/template.top
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/Makefile.am
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/Makefile.in
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/aminoacids.arn
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/aminoacids.c.tdb
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/aminoacids.hdb
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/aminoacids.n.tdb
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/aminoacids.r2b
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/aminoacids.rtp
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/aminoacids.vsd
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/atomtypes.atp
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/dna.arn
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/dna.hdb
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/dna.r2b
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/dna.rtp
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/ffbonded.itp
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/ffnonbonded.itp
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/forcefield.itp
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/gbsa.itp
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/ions.itp
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/rna.arn
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/rna.hdb
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/rna.r2b
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/rna.rtp
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/spc.itp
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/spce.itp
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/tip3p.itp
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/tip4p.itp
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/tip4pew.itp
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/tip5p.itp
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/urea.itp
PyMEMENTO/tests/test_data/template_multichain/amber14sb.ff/watermodels.dat