LICENSE.md
README.md
pyproject.toml
src/eigenp_utils/Inter-Regular.ttf
src/eigenp_utils/__init__.py
src/eigenp_utils/clahe_equalize_adapthist.py
src/eigenp_utils/extended_depth_of_focus.py
src/eigenp_utils/image_and_labels_utils.py
src/eigenp_utils/image_io.py
src/eigenp_utils/intensity_rescaling.py
src/eigenp_utils/io.py
src/eigenp_utils/iso_scatter.js
src/eigenp_utils/labels_cmap_data.py
src/eigenp_utils/maxproj_registration.py
src/eigenp_utils/plotting_utils.py
src/eigenp_utils/scientific.mplstyle
src/eigenp_utils/single_cell.py
src/eigenp_utils/spline_utils.py
src/eigenp_utils/stats.py
src/eigenp_utils/surface_extraction.py
src/eigenp_utils/task_calendar_scheduler.py
src/eigenp_utils/tnia_plotting_3d.py
src/eigenp_utils/tnia_plotting_anywidgets.css
src/eigenp_utils/tnia_plotting_anywidgets.js
src/eigenp_utils/tnia_plotting_anywidgets.py
src/eigenp_utils.egg-info/PKG-INFO
src/eigenp_utils.egg-info/SOURCES.txt
src/eigenp_utils.egg-info/dependency_links.txt
src/eigenp_utils.egg-info/requires.txt
src/eigenp_utils.egg-info/top_level.txt
tests/test_annotation_confidence.py
tests/test_archetype_plot_args.py
tests/test_archetype_properties.py
tests/test_bidirectional_drift_sign.py
tests/test_brightness_invariants.py
tests/test_clahe_correctness.py
tests/test_colormap_maker.py
tests/test_depth_of_focus.py
tests/test_depth_of_focus_subpixel.py
tests/test_drift_bias_oscillation.py
tests/test_drift_correction_accuracy.py
tests/test_drift_edge_robustness.py
tests/test_drift_integrity.py
tests/test_drift_subpixel_precision.py
tests/test_edof_interpolation.py
tests/test_focus_properties.py
tests/test_gamma_auto.py
tests/test_image_and_labels_invariants.py
tests/test_image_and_labels_utils.py
tests/test_image_io.py
tests/test_io.py
tests/test_marimo_update.py
tests/test_marker_plot.py
tests/test_maxproj_registration.py
tests/test_moran_cancellation.py
tests/test_moran_general_weights.py
tests/test_moran_memory.py
tests/test_moran_properties.py
tests/test_moran_statistics.py
tests/test_multiscale_coarsening.py
tests/test_negative_selection.py
tests/test_pacmap_init.py
tests/test_pacmap_naming.py
tests/test_plotting_utils.py
tests/test_preprocess_subset.py
tests/test_raincloud_dodge.py
tests/test_raincloud_hue.py
tests/test_raincloud_plot.py
tests/test_score_celltypes_binned.py
tests/test_show_zyx_scale_bar.py
tests/test_single_cell_binned.py
tests/test_single_cell_correlations.py
tests/test_single_cell_extract.py
tests/test_single_cell_kknn.py
tests/test_single_cell_kknn_classifier.py
tests/test_single_cell_kknn_pbmc.py
tests/test_single_cell_kknn_temp_key.py
tests/test_single_cell_lineage.py
tests/test_single_cell_n_neighbors.py
tests/test_single_cell_obs_csv.py
tests/test_single_cell_plot.py
tests/test_spline_invariants.py
tests/test_spline_utils.py
tests/test_stat_defaults.py
tests/test_stats.py
tests/test_surface_accuracy.py
tests/test_surface_extraction.py
tests/test_tnia_annotator_widget.py
tests/test_tnia_figsize_scale.py
tests/test_tnia_plotting_anywidgets.py
tests/test_tnia_plotting_anywidgets_3d_logic.py
tests/test_visual_utils.py
tests/test_volcano.py
tests/test_volcano_reproduction.py