Metadata-Version: 2.3
Name: singlecell-cookbook
Version: 0.1.2
Summary: A collection of tools for analyzing single-cell genomics data.
Author-email: Argenis Arriojas <arriojasmaldonado001@umb.edu>
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Developers
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.11
Classifier: Programming Language :: Python :: 3.12
Classifier: Programming Language :: Python :: 3.13
Requires-Python: >=3.11
Provides-Extra: dev
Requires-Dist: bump2version>=1.0.1; extra == 'dev'
Requires-Dist: myst-parser>=4.0.0; extra == 'dev'
Requires-Dist: pre-commit>=4.0.1; extra == 'dev'
Requires-Dist: pytest>=8.3.3; extra == 'dev'
Requires-Dist: ruff>=0.8.0; extra == 'dev'
Requires-Dist: sphinx-autodoc-typehints>=2.5.0; extra == 'dev'
Requires-Dist: sphinx-rtd-theme>=3.0.1; extra == 'dev'
Requires-Dist: sphinx>=8.1.3; extra == 'dev'
Description-Content-Type: text/markdown

# singlecell-cookbook

[![Tests](https://github.com/argearriojas/singlecell-cookbook/actions/workflows/tests.yml/badge.svg)](https://github.com/argearriojas/singlecell-cookbook/actions/workflows/tests.yml)

A collection of tools for analyzing single-cell genomics data.

## Installation

You can install the package using pip:

```bash
pip install singlecell-cookbook
```

For development installation:

```bash
git clone https://github.com/argearriojas/singlecell-cookbook.git
cd singlecell-cookbook
pip install -e ".[dev]"
```

## Documentation

Documentation is available at [Read the Docs](https://singlecell-cookbook.readthedocs.io/).

## Development

To set up the development environment:

1. Clone the repository
2. Install development dependencies: `pip install -e ".[dev]"`
3. Install pre-commit hooks: `pre-commit install`

## License

TBD. We need to assess the license according to the imported packages.

## Author

Argenis Arriojas ([arriojasmaldonado001@umb.edu](mailto:arriojasmaldonado001@umb.edu))
