{% extends "layout_bs4.html" %} {% from "overview/institute_sidebar.html" import institute_actionbar %} {% block title %} {{ super() }} - {{ institute.display_name }} {% endblock %} {% block top_nav %} {{ super() }}
No ClinVar submission was found. You can create one by clicking on "Submit to ClinVar" from the page of a pinned variant.
{% endif %}ID | Type | Case | Refseq | Gene | HGVS | Significance | |||||
---|---|---|---|---|---|---|---|---|---|---|---|
{{loop.index}} | {% if subm_variant.category == 'sv' %} {% do var_key_name.update( {subm_variant.local_id : '_'.join([subm_variant.chromosome, subm_variant.breakpoint1, subm_variant.ref[0:5], subm_variant.alt[0:5]]) }) %}{{var_key_name[subm_variant.local_id]}} | SV |
{% else %}
{% do var_key_name.update( {subm_variant.local_id : '_'.join([subm_variant.chromosome, subm_variant.start, subm_variant.ref[0:5], subm_variant.alt[0:5]]) }) %}
{{var_key_name[subm_variant.local_id]}} | SNV |
{% endif %}
{{subm_obj.cases[subm_variant.case_id]}} | {{subm_variant.ref_seq or '-'}} | {{subm_variant.gene_symbol or '-'}} | {{subm_variant.hgvs or '-'}} | {{subm_variant.clinsig}} | ||
|
This submission is open but has no variants yet.
{% endif %}Individual ID | Case ID | Clinical features | Variant ID | Allele origin | |||
---|---|---|---|---|---|---|---|
{{loop.index}} | {{subm_obj.cases[case.case_id]}} | {{case.clin_features}} | {{var_key_name[case.linking_id]}} | {{case.allele_origin}} | |||
No case data provided for the above variants
{% endif %}