CHANGELOG.md
CITATION.cff
CODE_OF_CONDUCT.md
CONTRIBUTING.md
LICENSE
MANIFEST.in
NOTICE
README.md
SECURITY.md
SUPPORT.md
pyproject.toml
docs/README.md
docs/analytical-phantom-validation.md
docs/architecture.md
docs/cache-and-memory.md
docs/colocalization-method-notes.md
docs/colocalization-racc-plan.md
docs/developer-notes.md
docs/io-user-guide.md
docs/measurement-workflows.md
docs/mitomorph-feature-parity.md
docs/node-roadmap-history.md
docs/node-roadmap.md
docs/object-mesh-morphology-plan.md
docs/ome-io-plan.md
docs/operator-tips.md
docs/planning.md
docs/psf-and-deconvolution-plan.md
docs/release-runbook.md
docs/research-and-publication.md
docs/skeleton-nodes.md
docs/user-guide.md
docs/assets/branding/README.md
docs/assets/user-guide/vipp-3d-deconvolution-graph.png
docs/assets/user-guide/vipp-3d-deconvolution-workspace.png
docs/assets/user-guide/vipp-example-chooser.png
examples/README.md
examples/otsu-red-channel-labels.json
examples/red-channel-merged-measurement-table.json
examples/red-channel-object-intensity-measurements.json
examples/synthetic-3d-deconvolution-rl-tv.json
examples/synthetic-3d-mesh-morphology.json
examples/synthetic-advanced-skeleton-network.json
examples/synthetic-colocalization-racc.json
examples/synthetic-deconvolution-rl-tv.json
examples/synthetic-derived-object-morphology.json
examples/synthetic-measurement-summary.json
examples/synthetic-object-colocalization-association.json
examples/synthetic-skeleton-qc.json
src/napari_vipp/__init__.py
src/napari_vipp/_graph.py
src/napari_vipp/_sample_data.py
src/napari_vipp/_theme.py
src/napari_vipp/_widget.py
src/napari_vipp/napari.yaml
src/napari_vipp.egg-info/PKG-INFO
src/napari_vipp.egg-info/SOURCES.txt
src/napari_vipp.egg-info/dependency_links.txt
src/napari_vipp.egg-info/entry_points.txt
src/napari_vipp.egg-info/requires.txt
src/napari_vipp.egg-info/top_level.txt
src/napari_vipp/core/__init__.py
src/napari_vipp/core/channel_colors.py
src/napari_vipp/core/export.py
src/napari_vipp/core/graph_layout.py
src/napari_vipp/core/graph_search.py
src/napari_vipp/core/metadata.py
src/napari_vipp/core/operations.py
src/napari_vipp/core/pipeline.py
src/napari_vipp/core/preview.py
src/napari_vipp/core/progress.py
src/napari_vipp/core/tables.py
src/napari_vipp/core/workflow.py
src/napari_vipp/core/io/__init__.py
src/napari_vipp/core/io/microscope.py
src/napari_vipp/core/io/model.py
src/napari_vipp/core/io/numpy_io.py
src/napari_vipp/core/io/ome_zarr.py
src/napari_vipp/core/io/raster.py
src/napari_vipp/core/io/registry.py
src/napari_vipp/core/io/tiff.py
src/napari_vipp/examples/otsu-red-channel-labels.json
src/napari_vipp/examples/red-channel-merged-measurement-table.json
src/napari_vipp/examples/red-channel-object-intensity-measurements.json
src/napari_vipp/examples/synthetic-3d-deconvolution-rl-tv.json
src/napari_vipp/examples/synthetic-3d-mesh-morphology.json
src/napari_vipp/examples/synthetic-advanced-skeleton-network.json
src/napari_vipp/examples/synthetic-colocalization-racc.json
src/napari_vipp/examples/synthetic-deconvolution-rl-tv.json
src/napari_vipp/examples/synthetic-derived-object-morphology.json
src/napari_vipp/examples/synthetic-measurement-summary.json
src/napari_vipp/examples/synthetic-object-colocalization-association.json
src/napari_vipp/examples/synthetic-skeleton-qc.json
src/napari_vipp/nodes/__init__.py