LICENSE
README.md
pyproject.toml
primerlab/__init__.py
primerlab/py.typed
primerlab/api/__init__.py
primerlab/api/public.py
primerlab/cli/__init__.py
primerlab/cli/batch_generator.py
primerlab/cli/console.py
primerlab/cli/formatter.py
primerlab/cli/main.py
primerlab/cli/progress.py
primerlab/config/__init__.py
primerlab/core/__init__.py
primerlab/core/audit.py
primerlab/core/batch_summary.py
primerlab/core/cache.py
primerlab/core/comparison.py
primerlab/core/config_loader.py
primerlab/core/config_validator.py
primerlab/core/database.py
primerlab/core/exceptions.py
primerlab/core/html_report.py
primerlab/core/logger.py
primerlab/core/masking.py
primerlab/core/output.py
primerlab/core/rationale.py
primerlab/core/reranking.py
primerlab/core/scoring.py
primerlab/core/sequence.py
primerlab/core/sequence_qc.py
primerlab/core/suggestion.py
primerlab/core/amplicon/__init__.py
primerlab/core/amplicon/analyzer.py
primerlab/core/amplicon/gc_clamp.py
primerlab/core/amplicon/gc_profile.py
primerlab/core/amplicon/models.py
primerlab/core/amplicon/quality_score.py
primerlab/core/amplicon/report.py
primerlab/core/amplicon/restriction_sites.py
primerlab/core/amplicon/secondary_structure.py
primerlab/core/amplicon/tm_prediction.py
primerlab/core/compat_check/__init__.py
primerlab/core/compat_check/dimer.py
primerlab/core/compat_check/models.py
primerlab/core/compat_check/overlap_detection.py
primerlab/core/compat_check/report.py
primerlab/core/compat_check/scoring.py
primerlab/core/compat_check/validator.py
primerlab/core/genotyping/__init__.py
primerlab/core/genotyping/allele_scoring.py
primerlab/core/genotyping/discrimination_tm.py
primerlab/core/genotyping/snp_position.py
primerlab/core/insilico/__init__.py
primerlab/core/insilico/binding.py
primerlab/core/insilico/engine.py
primerlab/core/insilico/report.py
primerlab/core/models/__init__.py
primerlab/core/models/amplicon.py
primerlab/core/models/blast.py
primerlab/core/models/metadata.py
primerlab/core/models/primer.py
primerlab/core/models/qc.py
primerlab/core/models/variant.py
primerlab/core/models/workflow_result.py
primerlab/core/offtarget/__init__.py
primerlab/core/offtarget/finder.py
primerlab/core/offtarget/integration.py
primerlab/core/offtarget/report.py
primerlab/core/offtarget/scorer.py
primerlab/core/offtarget/variant_check.py
primerlab/core/qc/__init__.py
primerlab/core/qc/base_qc.py
primerlab/core/qpcr/__init__.py
primerlab/core/qpcr/advanced.py
primerlab/core/qpcr/amplicon_qc.py
primerlab/core/qpcr/efficiency.py
primerlab/core/qpcr/melt_curve.py
primerlab/core/qpcr/melt_plot.py
primerlab/core/qpcr/melt_report.py
primerlab/core/qpcr/probe_binding.py
primerlab/core/qpcr/probe_position.py
primerlab/core/report/__init__.py
primerlab/core/report/alignment_view.py
primerlab/core/report/base_report.py
primerlab/core/report/generator.py
primerlab/core/report/html_enhanced.py
primerlab/core/report/html_export.py
primerlab/core/report/json_export.py
primerlab/core/report/models.py
primerlab/core/rtpcr/__init__.py
primerlab/core/rtpcr/exon_junction.py
primerlab/core/rtpcr/gdna_check.py
primerlab/core/rtpcr/transcript_loader.py
primerlab/core/species/__init__.py
primerlab/core/species/alignment.py
primerlab/core/species/binding.py
primerlab/core/species/loader.py
primerlab/core/species/models.py
primerlab/core/species/report.py
primerlab/core/species/scoring.py
primerlab/core/species/batch/__init__.py
primerlab/core/species/batch/batch_loader.py
primerlab/core/species/batch/cache.py
primerlab/core/species/batch/parallel.py
primerlab/core/tm_gradient/__init__.py
primerlab/core/tm_gradient/engine.py
primerlab/core/tm_gradient/models.py
primerlab/core/tm_gradient/prediction.py
primerlab/core/tm_gradient/report.py
primerlab/core/variants/__init__.py
primerlab/core/variants/models.py
primerlab/core/variants/nested.py
primerlab/core/variants/seminested.py
primerlab/core/visualization/__init__.py
primerlab/core/visualization/coverage_map.py
primerlab/core/visualization/gc_profile.py
primerlab/workflows/__init__.py
primerlab/workflows/pcr/__init__.py
primerlab/workflows/pcr/qc.py
primerlab/workflows/pcr/report.py
primerlab/workflows/pcr/workflow.py
primerlab/workflows/qpcr/__init__.py
primerlab/workflows/qpcr/design.py
primerlab/workflows/qpcr/progress.py
primerlab/workflows/qpcr/qc.py
primerlab/workflows/qpcr/report.py
primerlab/workflows/qpcr/workflow.py
primerlab_genomic.egg-info/PKG-INFO
primerlab_genomic.egg-info/SOURCES.txt
primerlab_genomic.egg-info/dependency_links.txt
primerlab_genomic.egg-info/entry_points.txt
primerlab_genomic.egg-info/requires.txt
primerlab_genomic.egg-info/top_level.txt
tests/test_additional_modules.py
tests/test_amplicon_analysis.py
tests/test_amplicon_cli_api.py
tests/test_api.py
tests/test_api_offtarget.py
tests/test_api_v023.py
tests/test_batch_compare.py
tests/test_batch_summary.py
tests/test_blast_cache.py
tests/test_blast_wrapper.py
tests/test_bulk_coverage.py
tests/test_cache.py
tests/test_cli.py
tests/test_cli_commands.py
tests/test_cli_extended.py
tests/test_cli_insilico.py
tests/test_cli_integration.py
tests/test_cli_main.py
tests/test_cli_qpcr.py
tests/test_cli_v073.py
tests/test_cli_workflows.py
tests/test_comparison.py
tests/test_compat_api.py
tests/test_compat_cli.py
tests/test_compat_models.py
tests/test_compat_report.py
tests/test_compat_scoring.py
tests/test_compat_template.py
tests/test_compat_validator.py
tests/test_config_v011.py
tests/test_core_analysis.py
tests/test_core_coverage.py
tests/test_coverage_map.py
tests/test_database.py
tests/test_dimer_engine.py
tests/test_dimer_matrix.py
tests/test_direct_execution.py
tests/test_exceptions.py
tests/test_export.py
tests/test_genotyping.py
tests/test_heavy_coverage.py
tests/test_html_enhanced.py
tests/test_insilico.py
tests/test_insilico_v021.py
tests/test_insilico_v022.py
tests/test_insilico_v025.py
tests/test_integration.py
tests/test_low_coverage.py
tests/test_lowcoverage_modules.py
tests/test_masking.py
tests/test_melt_curve.py
tests/test_melt_plot.py
tests/test_mocked_workflows.py
tests/test_model_serialization.py
tests/test_nested_pcr.py
tests/test_offtarget.py
tests/test_offtarget_compat.py
tests/test_overlap_detection.py
tests/test_parallel_blast.py
tests/test_pcr.py
tests/test_presets.py
tests/test_primer3_mocked.py
tests/test_probe_binding.py
tests/test_qpcr.py
tests/test_qpcr_advanced.py
tests/test_qpcr_amplicon.py
tests/test_qpcr_efficiency.py
tests/test_report.py
tests/test_report_formatter.py
tests/test_reranking.py
tests/test_rtpcr.py
tests/test_scoring.py
tests/test_seminested_pcr.py
tests/test_sequence.py
tests/test_sequence_qc.py
tests/test_species.py
tests/test_species_batch.py
tests/test_species_cli.py
tests/test_species_report.py
tests/test_species_scoring.py
tests/test_stats.py
tests/test_suggestion.py
tests/test_tm_gradient.py
tests/test_tm_gradient_cli.py
tests/test_vcf_parser.py
tests/test_vienna_fallback.py
tests/test_visualization.py