LICENCE
README.rst
pyproject.toml
cemd/__init__.py
cemd/_constants.py
cemd.egg-info/PKG-INFO
cemd.egg-info/SOURCES.txt
cemd.egg-info/dependency_links.txt
cemd.egg-info/entry_points.txt
cemd.egg-info/requires.txt
cemd.egg-info/top_level.txt
cemd/analysis/__init__.py
cemd/analysis/density.py
cemd/analysis/diffusion.py
cemd/analysis/rdf.py
cemd/analysis/silicates.py
cemd/analysis/tcf.py
cemd/analysis/util.py
cemd/analysis/velocities.py
cemd/build/__init__.py
cemd/build/_packmol.py
cemd/build/base.py
cemd/build/glass.py
cemd/build/interface.py
cemd/build/solution.py
cemd/build/split.py
cemd/build/surface.py
cemd/build/_structures/__init__.py
cemd/build/_structures/aft_moore.cif
cemd/build/_structures/co3.pdb
cemd/build/_structures/h2o.lt
cemd/build/_structures/ho.sdf
cemd/build/_structures/so4.pdb
cemd/build/_structures/tob11a_hamid.cif
cemd/build/_structures/tob11a_merlino.cif
cemd/build/cement_hydrates/__init__.py
cemd/build/cement_hydrates/_interlayer_helpers.py
cemd/build/cement_hydrates/_silicate_helpers.py
cemd/build/cement_hydrates/hydrates.py
cemd/core/__init__.py
cemd/core/_edit.py
cemd/core/_format.py
cemd/core/atomic_system.py
cemd/core/forcefield_classes.py
cemd/core/forcefield_mixin.py
cemd/core/topology_mixin.py
cemd/core/_io/__init__.py
cemd/core/_io/io_mixin.py
cemd/core/_io/formats/__init__.py
cemd/core/_io/formats/base.py
cemd/core/_io/formats/cif.py
cemd/core/_io/formats/lammps.py
cemd/core/_io/formats/lt.py
cemd/core/_io/formats/mda.py
cemd/core/_io/formats/pdb.py
cemd/core/_io/formats/pmg.py
cemd/core/_io/formats/sdf.py
cemd/core/_io/formats/smiles.py
cemd/core/_io/sources/cod.py
cemd/core/_io/sources/pubchem.py
cemd/core/_view/__init__.py
cemd/core/_view/config.py
cemd/core/_view/default_vmd_config.toml
cemd/core/_view/view.py
cemd/core/_view/view.tcl
cemd/forcefield/__init__.py
cemd/forcefield/_config.py
cemd/forcefield/_editor.py
cemd/forcefield/forcefield_database.py
cemd/forcefield/models.py
cemd/forcefield/_parsers/__init__.py
cemd/forcefield/_parsers/_base.py
cemd/forcefield/_parsers/_gromos.py
cemd/forcefield/_parsers/_iff_charmm.py
cemd/forcefield/_parsers/_iff_cvff.py
cemd/forcefield/_parsers/_toml.py
cemd/forcefield/db/GROMOS_54A7_ATB.lt
cemd/forcefield/db/charmm27_interface_v1_5.prm
cemd/forcefield/db/clayff.toml
cemd/forcefield/db/cshff2014.toml
cemd/forcefield/db/cvff_interface_v1_5.frc
cemd/forcefield/db/guillot2007.toml
cemd/forcefield/db/iff.toml
cemd/forcefield/db/raiteri2015.toml
cemd/forcefield/db/solcon.toml
cemd/forcefield/db/spc.toml
cemd/forcefield/db/spc_fw.toml
cemd/forcefield/db/spce.toml
cemd/forcefield/db/sperinck.toml
cemd/forcefield/db/tip3p.toml
cemd/forcefield/db/tip4p2005.toml
cemd/forcefield/db/tip4p_ew.toml
cemd/forcefield/db/wang2008.toml
cemd/gui/__init__.py
cemd/gui/_userdata.py
cemd/gui/default_config.json
cemd/gui/main_window.py
cemd/gui/plotter_widget.py
cemd/gui/tabs.py
cemd/gui/icons/add_mol.svg
cemd/gui/icons/atom.svg
cemd/gui/icons/bg-color.svg
cemd/gui/icons/camera.svg
cemd/gui/icons/cash.svg
cemd/gui/icons/channel.svg
cemd/gui/icons/cod.svg
cemd/gui/icons/connectivity.svg
cemd/gui/icons/droplet.svg
cemd/gui/icons/file-pdf.svg
cemd/gui/icons/glass.svg
cemd/gui/icons/interface.svg
cemd/gui/icons/interface2.svg
cemd/gui/icons/items-grid.svg
cemd/gui/icons/minus-circle.svg
cemd/gui/icons/minus-square-white.svg
cemd/gui/icons/minus-square.svg
cemd/gui/icons/minus.svg
cemd/gui/icons/mol.svg
cemd/gui/icons/move.svg
cemd/gui/icons/open.svg
cemd/gui/icons/orthogonalize.svg
cemd/gui/icons/paste.svg
cemd/gui/icons/plus-circle.svg
cemd/gui/icons/plus-square-white.svg
cemd/gui/icons/plus-square.svg
cemd/gui/icons/plus.svg
cemd/gui/icons/protonate.svg
cemd/gui/icons/pubchem.svg
cemd/gui/icons/pycsh.svg
cemd/gui/icons/question.svg
cemd/gui/icons/rdf.svg
cemd/gui/icons/reference.svg
cemd/gui/icons/replicate.svg
cemd/gui/icons/save-all.svg
cemd/gui/icons/save.svg
cemd/gui/icons/search.svg
cemd/gui/icons/silicate.svg
cemd/gui/icons/solution.svg
cemd/gui/icons/square.svg
cemd/gui/icons/surface.svg
cemd/gui/icons/trash.svg
cemd/gui/icons/wall.svg
cemd/gui/icons/wrap.svg
cemd/gui/icons/zap.svg
cemd/gui/logic/__init__.py
cemd/gui/logic/build.py
cemd/gui/logic/file_handler.py
cemd/gui/ui/__init__.py
cemd/gui/ui/analysis_view.py
cemd/gui/ui/atom_table.py
cemd/gui/ui/base_dialog.py
cemd/gui/ui/build.py
cemd/gui/ui/cod.py
cemd/gui/ui/gui_utils.py
cemd/gui/ui/managers.py
cemd/gui/ui/panels.py
cemd/gui/ui/pubchem.py
cemd/topology/__init__.py
cemd/topology/_apply.py
cemd/topology/predefined.py
cemd/topology/rules.py