# Secrets and local credentials
.env
.env.*
!.env.example
*.key
*.p12
*.pem
*.pfx
credentials.json

# Python build and caches
__pycache__/
*.py[cod]
.venv/
*.egg-info/
.pytest_cache/
.ruff_cache/
build/
dist/

# Runtime outputs and experiment-tracking state
output/
outputs/
wandb/
*.log
*.ckpt
*.pickle
*.pkl
*.pt
*.pth
journal_figures_cache/
journal_figures/

# Licensed third-party data is cached outside the source tree.
src/assaybench/data/depmap/CRISPRInferredCommonEssentials.csv
