LICENSE
README.md
setup.py
panCG/__init__.py
panCG/panCG.py
panCG.egg-info/PKG-INFO
panCG.egg-info/SOURCES.txt
panCG.egg-info/dependency_links.txt
panCG.egg-info/entry_points.txt
panCG.egg-info/requires.txt
panCG.egg-info/top_level.txt
panCG/bin/CE_RmCDS_to_CNS.py
panCG/bin/CEs_identification.py
panCG/bin/CnsGeneLink.py
panCG/bin/CnsSyntenyNet.py
panCG/bin/__init__.py
panCG/bin/callCNS.py
panCG/bin/cnsClustering.py
panCG/bin/cnsLineageSpeciSyn.py
panCG/bin/cnsMapMerge.py
panCG/bin/cnsRecall.py
panCG/bin/geneClustering.py
panCG/bin/geneLineageSpeciSyn.py
panCG/bin/geneMapMerge.py
panCG/bin/genePAV.py
panCG/bin/pancnsAssign.py
panCG/bin/pancnsMerge.py
panCG/bin/pancnsSort.py
panCG/bin/pangeneAssign.py
panCG/bin/paralogs.py
panCG/lib/CPM.py
panCG/lib/CnsCall.py
panCG/lib/CnsGeneLink.py
panCG/lib/LineageSpecicSynteny.py
panCG/lib/PhySynNet.py
panCG/lib/__init__.py
panCG/lib/base.py
panCG/lib/cns_recall.py
panCG/lib/indexAssign.py
panCG/lib/info.py
panCG/lib/pancns.py
panCG/lib/pancnsFilter.py
panCG/lib/pangeneIndex.py
panCG/lib/sqliteDatabase.py
panCG/scripts/CNS.anno.R