CHANGELOG.md
LICENSE
LICENSE-AGPL-3.0.txt
MANIFEST.in
README.md
example.bn
example_fbn.csv
pyproject.toml
setup.py
data/BoolNet_CellCycle_Network.rda
data/Common_Genes_Clusters.rda
data/Common_Genes_Leukeamia.rda
data/DAVID_gene_list.rda
data/ExampleNetwork.rda
data/ExampleTimeseriesData.rda
data/FBM_Leukeamia_Networks.rda
data/FBNExampleNetworks.rda
data/FBNcellcycleNetwork.rda
data/Leukeamia_Networks.rda
data/Leukeamia_Timeseries.rda
data/TFBM_Leukeamia_Networks.rda
data/fbm_leukeamia_network.rda
data/yeastTimeSeries.rda
fbnnet_core/__init__.py
fbnnet_core/application.py
fbnnet_core/attractor.py
fbnnet_core/batched_counts.py
fbnnet_core/boolnet.py
fbnnet_core/cube.py
fbnnet_core/data_utils.py
fbnnet_core/datasets.py
fbnnet_core/fbn_types.py
fbnnet_core/general_utils.py
fbnnet_core/network.py
fbnnet_core/network_app.py
fbnnet_core/network_graph.py
fbnnet_core/network_utils.py
fbnnet_core/tensor_mining.py
fbnnet_core.egg-info/PKG-INFO
fbnnet_core.egg-info/SOURCES.txt
fbnnet_core.egg-info/dependency_links.txt
fbnnet_core.egg-info/requires.txt
fbnnet_core.egg-info/top_level.txt
fbnnet_core/datasets/BoolNet_CellCycle_Network.json.gz
fbnnet_core/datasets/Common_Genes_Clusters.json.gz
fbnnet_core/datasets/Common_Genes_Leukeamia.json.gz
fbnnet_core/datasets/DAVID_Gene_List.json.gz
fbnnet_core/datasets/ExampleNetwork.json.gz
fbnnet_core/datasets/ExampleTimeseriesData.json.gz
fbnnet_core/datasets/FBM_Leukeamia_Networks.json.gz
fbnnet_core/datasets/FBNExampleNetworks.json.gz
fbnnet_core/datasets/FBNcellcycleNetwork.json.gz
fbnnet_core/datasets/Leukeamia_Networks.json.gz
fbnnet_core/datasets/Leukeamia_Timeseries.json.gz
fbnnet_core/datasets/TFBM_Leukeamia_Networks.json.gz
fbnnet_core/datasets/yeastTimeSeries.json.gz
src/fbn_chisq.cpp
src/fbn_chisq.h
src/fbn_column.cpp
src/fbn_column.h
src/fbn_column_bindings.cpp
src/fbn_core.cpp
src/fbn_core.h
src/fbn_matrix.cpp
src/fbn_matrix.h
src/fbn_matrix_bindings.cpp
src/fbn_tree.cpp
src/fbn_tree.h
src/fbn_utils.cpp
src/fbn_utils.h
tests/conftest.py
tests/test_application.py
tests/test_attractor.py
tests/test_batched_counts.py
tests/test_chisq.py
tests/test_cube.py
tests/test_datasets.py
tests/test_fbn_core.py
tests/test_fbn_core_r.py
tests/test_fbn_tree.py
tests/test_fbn_utility.py
tests/test_fbnnet_utils.py
tests/test_merge_cluster_networks.py
tests/test_network.py
tests/test_network_app.py
tests/test_network_graph.py
tests/test_network_stage2.py
tests/test_tensor_mining.py
tools/convert_r_datasets.py
tools/make_readme_figures.py