LICENSE
MANIFEST.in
README.md
pyproject.toml
setup.py
psmpa/__init__.py
psmpa/default.py
psmpa/pipeline.py
psmpa/place_seqs.py
psmpa/psmpa2_pipeline.py
psmpa/util.py
psmpa/wrap_hsp.py
psmpa.egg-info/PKG-INFO
psmpa.egg-info/SOURCES.txt
psmpa.egg-info/dependency_links.txt
psmpa.egg-info/top_level.txt
psmpa/Rscripts/castor_hsp.R
psmpa/Rscripts/castor_nsti.R
psmpa/default_files/bacteria/BGCs.txt.gz
psmpa/default_files/bacteria/pro_ref/pro_ref.fna
psmpa/default_files/bacteria/pro_ref/pro_ref.hmm
psmpa/default_files/bacteria/pro_ref/pro_ref.model
psmpa/default_files/bacteria/pro_ref/pro_ref.raxml_info
psmpa/default_files/bacteria/pro_ref/pro_ref.tre
psmpa/default_files/psmpa2/psmpa2_database_lineage.tsv.gz
psmpa/default_files/psmpa2/psmpa2_database_mean_float.tsv.gz
psmpa/default_files/psmpa2/psmpa2_database_mean_int.tsv.gz
psmpa/default_files/psmpa2/psmpa2_database_median_float.tsv.gz
psmpa/default_files/psmpa2/psmpa2_database_median_int.tsv.gz
psmpa/default_files/psmpa2/database/rna.ndb
psmpa/default_files/psmpa2/database/rna.nhr
psmpa/default_files/psmpa2/database/rna.nin
psmpa/default_files/psmpa2/database/rna.nog
psmpa/default_files/psmpa2/database/rna.nos
psmpa/default_files/psmpa2/database/rna.not
psmpa/default_files/psmpa2/database/rna.nsd
psmpa/default_files/psmpa2/database/rna.nsi
psmpa/default_files/psmpa2/database/rna.nsq
psmpa/default_files/psmpa2/database/rna.ntf
psmpa/default_files/psmpa2/database/rna.nto
scripts/hsp.py
scripts/place_seqs.py
scripts/psmpa1
scripts/psmpa2