__pycache__/
*.pyc
*.pyo
*.pyd
.Python
.venv/
venv/
*.egg-info/
dist/
build/
site/
.pytest_cache/
.coverage
htmlcov/
.ipynb_checkpoints

# macOS Finder metadata (any directory)
.DS_Store
**/.DS_Store

# Runtime artifacts
logs/
outputs/
/data/
*.log
*.out

# Internal design docs
docs/plans/

# Claude Code state
.claude/
wandb/

# Proprietary dataset manifest (obtain out of band; see manifests/registry.py)
manylatents/singlecell/data/manifests/*.csv
