.markdownlint.json
CHANGELOG.md
CITATION.cff
CODE_OF_CONDUCT.md
CONTRIBUTING.md
LICENSE
MANIFEST.in
Makefile
README.md
SECURITY.md
metrics-petri-logo.png
mkdocs.yml
mypy.ini
package-lock.json
package.md
pyproject.toml
pyrightconfig.json
requirements.txt
docs/batch-pipeline.md
docs/code-of-conduct.md
docs/contributing.md
docs/index.md
docs/model-card.md
docs/security.md
docs/user-guide.md
docs/api/analysis.md
docs/api/batch.md
docs/api/cropper.md
docs/api/index.md
docs/api/model.md
docs/api/reporting.md
input_images/06FEB/20260210_P001_06-FEB_WT_PCBM_SUB_d04_TOP.jpg
input_images/06FEB/20260212_P001_06-FEB_WT_PCBM_SUB_d06_TOP.jpg
input_images/06FEB/20260216_P001_06-FEB_WT_PCBM_SUB_d10_TOP.jpg
metrics_petri/__init__.py
metrics_petri/_model.py
metrics_petri/_paths.py
metrics_petri/_provenance.py
metrics_petri/py.typed
metrics_petri.egg-info/PKG-INFO
metrics_petri.egg-info/SOURCES.txt
metrics_petri.egg-info/dependency_links.txt
metrics_petri.egg-info/entry_points.txt
metrics_petri.egg-info/requires.txt
metrics_petri.egg-info/top_level.txt
metrics_petri/models/MODEL_CARD.md
metrics_petri/models/__init__.py
metrics_petri/models/best_area_w_0.7.pt
metrics_petri/models/best_area_w_0.7.pt.sha256
metrics_petri/pipeline/README.md
metrics_petri/pipeline/__init__.py
metrics_petri/pipeline/analysis.py
metrics_petri/pipeline/app.py
metrics_petri/pipeline/cli.py
metrics_petri/pipeline/model.py
metrics_petri/pipeline/reporting.py
metrics_petri/pipelinesam/README.md
metrics_petri/pipelinesam/__init__.py
metrics_petri/pipelinesam/cli.py
metrics_petri/pipelinesam/dish_cropper.py
metrics_petri/pipelinesam/image_metadata_gui.py
metrics_petri/pipelinesam/model_small_unet.py
metrics_petri/pipelinesam/pipeline.py
notebooks/example_metrics-petri.ipynb
outputs/.gitkeep
tests/__init__.py
tests/test_cli_options.py
tests/test_cli_paths.py
tests/test_gui_cli.py
tests/test_metadata.py
tests/test_metadata_schema.py
tests/test_metrics.py
tests/test_model_integrity.py
tests/test_pipeline_examples.py
tests/test_provenance.py
tests/test_texture_metrics.py