LICENSE
MANIFEST.in
README.rst
pyproject.toml
requirements.txt
setup.cfg
setup.py
tardis_em_analysis/__init__.py
tardis_em_analysis/_version.py
tardis_em_analysis/analysis.py
tardis_em_analysis/filament_structure.py
tardis_em_analysis/filament_utils.py
tardis_em_analysis/geometry_metrics.py
tardis_em_analysis/spatial_graph_utils.py
tardis_em_analysis/utils.py
tardis_em_analysis.egg-info/PKG-INFO
tardis_em_analysis.egg-info/SOURCES.txt
tardis_em_analysis.egg-info/dependency_links.txt
tardis_em_analysis.egg-info/entry_points.txt
tardis_em_analysis.egg-info/requires.txt
tardis_em_analysis.egg-info/top_level.txt
tardis_em_analysis/mt_classification/__init__.py
tardis_em_analysis/mt_classification/mt_classes.py
tardis_em_analysis/mt_classification/utils.py
tardis_em_analysis/napari_stitch/__init__.py
tardis_em_analysis/napari_stitch/__main__.py
tardis_em_analysis/napari_stitch/_geometry.py
tardis_em_analysis/napari_stitch/_widget.py
tardis_em_analysis/napari_stitch/napari.yaml
tardis_em_analysis/serial_stitch/__init__.py
tardis_em_analysis/serial_stitch/accel.py
tardis_em_analysis/serial_stitch/cli.py
tardis_em_analysis/serial_stitch/geometry.py
tardis_em_analysis/serial_stitch/image_pose.py
tardis_em_analysis/serial_stitch/image_warp.py
tardis_em_analysis/serial_stitch/io.py
tardis_em_analysis/serial_stitch/match.py
tardis_em_analysis/serial_stitch/stitch.py
tardis_em_analysis/serial_stitch/coarse/__init__.py
tardis_em_analysis/serial_stitch/coarse/ap_polarity.py
tardis_em_analysis/serial_stitch/coarse/coarse.py
tardis_em_analysis/serial_stitch/coarse/coarse_fusion.py
tardis_em_analysis/serial_stitch/coarse/coarse_hybrid.py
tardis_em_analysis/serial_stitch/coarse/cpd.py
tardis_em_analysis/serial_stitch/coarse/rotation_search.py
tardis_em_analysis/serial_stitch/matching/__init__.py
tardis_em_analysis/serial_stitch/matching/matcher.py
tardis_em_analysis/serial_stitch/matching/mt_endpoints.py
tardis_em_analysis/serial_stitch/matching/mt_transform.py
tardis_em_analysis/serial_stitch/pipeline/__init__.py
tardis_em_analysis/serial_stitch/pipeline/core.py
tardis_em_analysis/serial_stitch/pipeline/intensity_qc.py
tardis_em_analysis/serial_stitch/pipeline/qc.py
tardis_em_analysis/serial_stitch/pipeline/stitcher.py
tardis_em_analysis/serial_stitch/transform/__init__.py
tardis_em_analysis/serial_stitch/transform/applier.py
tardis_em_analysis/serial_stitch/transform/diagnostics.py
tardis_em_analysis/serial_stitch/transform/scale.py
tardis_em_analysis/serial_stitch/transform/solver.py
tardis_em_analysis/serial_stitch/transform/warp.py
tests/__init__.py
tests/conftest.py
tests/serial_stitching_utils.py
tests/test_ap_polarity.py
tests/test_applier.py
tests/test_boundary.py
tests/test_coarse.py
tests/test_coarse_fusion.py
tests/test_coarse_hybrid.py
tests/test_core.py
tests/test_cpd.py
tests/test_diagnostics.py
tests/test_entry.py
tests/test_intensity_qc.py
tests/test_matcher.py
tests/test_napari_stitch.py
tests/test_qc.py
tests/test_rotation_search.py
tests/test_smoke.py
tests/test_solver.py
tests/test_stitcher.py
tests/test_synthetic.py
tests/test_warp.py