LICENSE
MANIFEST.in
README.md
assign_targets.py
predict_operons.py
pyproject.toml
example/genome.gff
example/operons.tsv
example/tss.bed
example/expected/TFA_assigned_peaks.bed
example/expected/TFB_assigned_peaks.bed
example/expected/TFC_assigned_peaks.bed
example/expected/TFD_assigned_peaks.bed
example/expected/predicted_operon_pairs.tsv
example/expected/predicted_operons.tsv
example/peaks/TFA.narrowPeak
example/peaks/TFB.narrowPeak
example/peaks/TFC.narrowPeak
example/peaks/TFD.narrowPeak
prokapeak.egg-info/PKG-INFO
prokapeak.egg-info/SOURCES.txt
prokapeak.egg-info/dependency_links.txt
prokapeak.egg-info/entry_points.txt
prokapeak.egg-info/requires.txt
prokapeak.egg-info/top_level.txt
tests/test_assign_targets.py
tests/test_predict_operons.py
tests/uniop_fixtures.sh
tests/data/uniop_example/uniop.genes
tests/data/uniop_example/uniop.operon
tests/data/uniop_example/uniop.pred