LICENSE
README.md
pyproject.toml
src/ldt/__init__.py
src/ldt/bridge/__init__.py
src/ldt/bridge/catalog.py
src/ldt/bridge/operation_registry.py
src/ldt/bridge/operations.py
src/ldt/bridge/runner.py
src/ldt/bridge/runtime_warning_filters.py
src/ldt/data_preparation/__init__.py
src/ldt/data_preparation/catalog.py
src/ldt/data_preparation/operations.py
src/ldt/data_preparation/config/go_cli_catalog.json
src/ldt/data_preparation/presets/__init__.py
src/ldt/data_preparation/presets/prepare_mcs_by_leap/__init__.py
src/ldt/data_preparation/presets/prepare_mcs_by_leap/defaults.yaml
src/ldt/data_preparation/presets/prepare_mcs_by_leap/pipeline.py
src/ldt/data_preparation/presets/prepare_mcs_by_leap/run.py
src/ldt/data_preparation/presets/prepare_mcs_by_leap/tool.py
src/ldt/data_preparation/presets/prepare_mcs_by_leap/preview/__init__.py
src/ldt/data_preparation/presets/prepare_mcs_by_leap/preview/stage.py
src/ldt/data_preparation/presets/prepare_mcs_by_leap/stage_1_wave_paths/__init__.py
src/ldt/data_preparation/presets/prepare_mcs_by_leap/stage_1_wave_paths/datasets.yaml
src/ldt/data_preparation/presets/prepare_mcs_by_leap/stage_1_wave_paths/stage.py
src/ldt/data_preparation/presets/prepare_mcs_by_leap/stage_2_subjects/__init__.py
src/ldt/data_preparation/presets/prepare_mcs_by_leap/stage_2_subjects/stage.py
src/ldt/data_preparation/presets/prepare_mcs_by_leap/stage_2_subjects/subject_keys.yaml
src/ldt/data_preparation/presets/prepare_mcs_by_leap/stage_3_features/__init__.py
src/ldt/data_preparation/presets/prepare_mcs_by_leap/stage_3_features/longitudinal_features.yaml
src/ldt/data_preparation/presets/prepare_mcs_by_leap/stage_3_features/non_longitudinal_features.yaml
src/ldt/data_preparation/presets/prepare_mcs_by_leap/stage_3_features/stage.py
src/ldt/data_preparation/presets/prepare_mcs_by_leap/stage_4_composites/__init__.py
src/ldt/data_preparation/presets/prepare_mcs_by_leap/stage_4_composites/composites.yaml
src/ldt/data_preparation/presets/prepare_mcs_by_leap/stage_4_composites/stage.py
src/ldt/data_preparation/presets/prepare_mcs_by_leap/stage_5_output_format/__init__.py
src/ldt/data_preparation/presets/prepare_mcs_by_leap/stage_5_output_format/stage.py
src/ldt/data_preparation/tools/__init__.py
src/ldt/data_preparation/tools/data_conversion/__init__.py
src/ldt/data_preparation/tools/data_conversion/run.py
src/ldt/data_preparation/tools/data_conversion/converters/__init__.py
src/ldt/data_preparation/tools/data_conversion/converters/_tabular_converter.py
src/ldt/data_preparation/tools/data_conversion/converters/csv_to_parquet.py
src/ldt/data_preparation/tools/data_conversion/converters/csv_to_stata.py
src/ldt/data_preparation/tools/data_conversion/converters/parquet_to_csv.py
src/ldt/data_preparation/tools/data_conversion/converters/parquet_to_stata.py
src/ldt/data_preparation/tools/data_conversion/converters/stata_to_csv.py
src/ldt/data_preparation/tools/data_conversion/converters/stata_to_parquet.py
src/ldt/data_preparation/tools/synthetic_data_generation/__init__.py
src/ldt/data_preparation/tools/synthetic_data_generation/run.py
src/ldt/data_preparation/tools/synthetic_data_generation/generators/__init__.py
src/ldt/data_preparation/tools/synthetic_data_generation/generators/event_shock_recovery.py
src/ldt/data_preparation/tools/synthetic_data_generation/generators/harmonisation_challenge.py
src/ldt/data_preparation/tools/synthetic_data_generation/generators/missing_data_scenarios.py
src/ldt/data_preparation/tools/synthetic_data_generation/generators/piecewise_changepoint.py
src/ldt/data_preparation/tools/synthetic_data_generation/generators/trend_patterns.py
src/ldt/data_preprocessing/__init__.py
src/ldt/data_preprocessing/catalog.py
src/ldt/data_preprocessing/operations.py
src/ldt/data_preprocessing/config/go_cli_catalog.json
src/ldt/data_preprocessing/presets/__init__.py
src/ldt/data_preprocessing/presets/preprocess_mcs_by_leap/__init__.py
src/ldt/data_preprocessing/presets/preprocess_mcs_by_leap/run.py
src/ldt/data_preprocessing/presets/preprocess_mcs_by_leap/tool.py
src/ldt/data_preprocessing/support/__init__.py
src/ldt/data_preprocessing/support/inputs.py
src/ldt/data_preprocessing/support/skrub_compat.py
src/ldt/data_preprocessing/tools/__init__.py
src/ldt/data_preprocessing/tools/aggregate_long_to_cross_sectional/__init__.py
src/ldt/data_preprocessing/tools/aggregate_long_to_cross_sectional/run.py
src/ldt/data_preprocessing/tools/build_trajectories/__init__.py
src/ldt/data_preprocessing/tools/build_trajectories/discovery.py
src/ldt/data_preprocessing/tools/build_trajectories/run.py
src/ldt/data_preprocessing/tools/build_trajectories/trajectory.py
src/ldt/data_preprocessing/tools/build_trajectories/trajectories/__init__.py
src/ldt/data_preprocessing/tools/build_trajectories/trajectories/clustermld.py
src/ldt/data_preprocessing/tools/build_trajectories/trajectories/dtw.py
src/ldt/data_preprocessing/tools/build_trajectories/trajectories/gmm/__init__.py
src/ldt/data_preprocessing/tools/build_trajectories/trajectories/gmm/fit_gmm_lcmm.R
src/ldt/data_preprocessing/tools/build_trajectories/trajectories/gmm/gmm.py
src/ldt/data_preprocessing/tools/build_trajectories/trajectories/lcga/__init__.py
src/ldt/data_preprocessing/tools/build_trajectories/trajectories/lcga/fit_lcga_lcmm.R
src/ldt/data_preprocessing/tools/build_trajectories/trajectories/lcga/lcga.py
src/ldt/data_preprocessing/tools/clean_dataset/__init__.py
src/ldt/data_preprocessing/tools/clean_dataset/run.py
src/ldt/data_preprocessing/tools/combine_dataset_with_trajectories/__init__.py
src/ldt/data_preprocessing/tools/combine_dataset_with_trajectories/run.py
src/ldt/data_preprocessing/tools/harmonise_categories/__init__.py
src/ldt/data_preprocessing/tools/harmonise_categories/run.py
src/ldt/data_preprocessing/tools/missing_imputation/__init__.py
src/ldt/data_preprocessing/tools/missing_imputation/discovery.py
src/ldt/data_preprocessing/tools/missing_imputation/run.py
src/ldt/data_preprocessing/tools/missing_imputation/imputers/__init__.py
src/ldt/data_preprocessing/tools/missing_imputation/imputers/imputer.py
src/ldt/data_preprocessing/tools/missing_imputation/imputers/mice.py
src/ldt/data_preprocessing/tools/pivot_long_to_wide/__init__.py
src/ldt/data_preprocessing/tools/pivot_long_to_wide/run.py
src/ldt/data_preprocessing/tools/remove_columns/__init__.py
src/ldt/data_preprocessing/tools/remove_columns/run.py
src/ldt/data_preprocessing/tools/rename_feature/__init__.py
src/ldt/data_preprocessing/tools/rename_feature/run.py
src/ldt/data_preprocessing/tools/show_table/__init__.py
src/ldt/data_preprocessing/tools/show_table/run.py
src/ldt/data_preprocessing/tools/trajectories_viz/__init__.py
src/ldt/data_preprocessing/tools/trajectories_viz/render.py
src/ldt/data_preprocessing/tools/trajectories_viz/run.py
src/ldt/data_preprocessing/tools/trajectories_viz/techniques/__init__.py
src/ldt/data_preprocessing/tools/trajectories_viz/techniques/_inputs.py
src/ldt/data_preprocessing/tools/trajectories_viz/techniques/class_spaghetti.py
src/ldt/data_preprocessing/tools/trajectories_viz/techniques/mean_profiles.py
src/ldt/data_preprocessing/tools/trajectories_viz/techniques/trajectory_sizes.py
src/ldt/machine_learning/__init__.py
src/ldt/machine_learning/catalog.py
src/ldt/machine_learning/operations.py
src/ldt/machine_learning/config/go_cli_catalog.json
src/ldt/machine_learning/presets/__init__.py
src/ldt/machine_learning/support/__init__.py
src/ldt/machine_learning/support/inputs.py
src/ldt/machine_learning/support/runtime_validation.py
src/ldt/machine_learning/tools/__init__.py
src/ldt/machine_learning/tools/metrics.py
src/ldt/machine_learning/tools/target_scenarios.py
src/ldt/machine_learning/tools/bench_standard_and_longitudinal_ml/__init__.py
src/ldt/machine_learning/tools/bench_standard_and_longitudinal_ml/run.py
src/ldt/machine_learning/tools/benchmark_longitudinal_ml/__init__.py
src/ldt/machine_learning/tools/benchmark_longitudinal_ml/run.py
src/ldt/machine_learning/tools/benchmark_standard_ml/__init__.py
src/ldt/machine_learning/tools/benchmark_standard_ml/run.py
src/ldt/machine_learning/tools/explainability/__init__.py
src/ldt/machine_learning/tools/explainability/shap_analysis/__init__.py
src/ldt/machine_learning/tools/explainability/shap_analysis/run.py
src/ldt/machine_learning/tools/explainability/shap_analysis/service.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/__init__.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/discovery.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/inputs.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/run.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/target_encoding.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/__init__.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/aggrfunc_mean_decision_tree.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/aggrfunc_mean_extra_trees.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/aggrfunc_mean_gradient_boosting.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/aggrfunc_mean_knn.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/aggrfunc_mean_logistic_regression.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/aggrfunc_mean_random_forest.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/aggrfunc_mean_svm.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/aggrfunc_median_decision_tree.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/aggrfunc_median_extra_trees.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/aggrfunc_median_gradient_boosting.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/aggrfunc_median_knn.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/aggrfunc_median_logistic_regression.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/aggrfunc_median_random_forest.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/aggrfunc_median_svm.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/base.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/merwav_time_minus_decision_tree.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/merwav_time_minus_extra_trees.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/merwav_time_minus_gradient_boosting.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/merwav_time_minus_knn.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/merwav_time_minus_logistic_regression.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/merwav_time_minus_random_forest.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/merwav_time_minus_svm.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/merwav_time_plus_lexico_decision_tree.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/merwav_time_plus_lexico_deep_forest.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/merwav_time_plus_lexico_gradient_boosting.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/merwav_time_plus_lexico_random_forest.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/merwav_time_plus_nested_trees.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/sepwav_stacking_dt_decision_tree.py
src/ldt/machine_learning/tools/longitudinal_machine_learning/estimators/sepwav_stacking_dt_extra_trees.py
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