LICENSE
README.md
pyproject.toml
setup.cfg
src/tomviz_kernels/AddConstant.json
src/tomviz_kernels/AddConstant.py
src/tomviz_kernels/AddPoissonNoise.json
src/tomviz_kernels/AddPoissonNoise.py
src/tomviz_kernels/AutoCenterOfMassTiltImageAlignment.json
src/tomviz_kernels/AutoCenterOfMassTiltImageAlignment.py
src/tomviz_kernels/AutoCrossCorrelationTiltImageAlignment.json
src/tomviz_kernels/AutoCrossCorrelationTiltImageAlignment.py
src/tomviz_kernels/AutoTiltAxisRotationAlignment.json
src/tomviz_kernels/AutoTiltAxisRotationAlignment.py
src/tomviz_kernels/AutoTiltAxisShiftAlignment.json
src/tomviz_kernels/AutoTiltAxisShiftAlignment.py
src/tomviz_kernels/BinTiltSeriesByTwo.json
src/tomviz_kernels/BinTiltSeriesByTwo.py
src/tomviz_kernels/BinVolumeByTwo.json
src/tomviz_kernels/BinVolumeByTwo.py
src/tomviz_kernels/BinaryClose.json
src/tomviz_kernels/BinaryClose.py
src/tomviz_kernels/BinaryDilate.json
src/tomviz_kernels/BinaryDilate.py
src/tomviz_kernels/BinaryErode.json
src/tomviz_kernels/BinaryErode.py
src/tomviz_kernels/BinaryMinMaxCurvatureFlow.json
src/tomviz_kernels/BinaryMinMaxCurvatureFlow.py
src/tomviz_kernels/BinaryOpen.json
src/tomviz_kernels/BinaryOpen.py
src/tomviz_kernels/BinaryThreshold.json
src/tomviz_kernels/BinaryThreshold.py
src/tomviz_kernels/CircleMask.json
src/tomviz_kernels/CircleMask.py
src/tomviz_kernels/ClearVolume.json
src/tomviz_kernels/ClearVolume.py
src/tomviz_kernels/ClipEdges.json
src/tomviz_kernels/ClipEdges.py
src/tomviz_kernels/CombineDatasets.json
src/tomviz_kernels/CombineDatasets.py
src/tomviz_kernels/ConnectedComponents.json
src/tomviz_kernels/ConnectedComponents.py
src/tomviz_kernels/ConstantDataset.json
src/tomviz_kernels/ConstantDataset.py
src/tomviz_kernels/CylindricalCrop.json
src/tomviz_kernels/CylindricalCrop.py
src/tomviz_kernels/DeconvolutionDenoise.json
src/tomviz_kernels/DeconvolutionDenoise.py
src/tomviz_kernels/DeleteSlices.json
src/tomviz_kernels/DeleteSlices.py
src/tomviz_kernels/DummyMolecule.json
src/tomviz_kernels/DummyMolecule.py
src/tomviz_kernels/ElastixRegistration.json
src/tomviz_kernels/ElastixRegistration.py
src/tomviz_kernels/FFT_AbsLog.json
src/tomviz_kernels/FFT_AbsLog.py
src/tomviz_kernels/FourierFilter.json
src/tomviz_kernels/FourierFilter.py
src/tomviz_kernels/FourierMask.json
src/tomviz_kernels/FourierMask.py
src/tomviz_kernels/FourierPeakMask.json
src/tomviz_kernels/FourierPeakMask.py
src/tomviz_kernels/FourierShellCorrelation.json
src/tomviz_kernels/FourierShellCorrelation.py
src/tomviz_kernels/GaussianFilter.json
src/tomviz_kernels/GaussianFilter.py
src/tomviz_kernels/GaussianFilterTiltSeries.json
src/tomviz_kernels/GaussianFilterTiltSeries.py
src/tomviz_kernels/GenerateTiltSeries.json
src/tomviz_kernels/GenerateTiltSeries.py
src/tomviz_kernels/GradientMagnitude2D_Sobel.json
src/tomviz_kernels/GradientMagnitude2D_Sobel.py
src/tomviz_kernels/GradientMagnitude_Sobel.json
src/tomviz_kernels/GradientMagnitude_Sobel.py
src/tomviz_kernels/HannWindow3D.json
src/tomviz_kernels/HannWindow3D.py
src/tomviz_kernels/ImageMath.json
src/tomviz_kernels/ImageMath.py
src/tomviz_kernels/InvertData.json
src/tomviz_kernels/InvertData.py
src/tomviz_kernels/LabelObjectAttributes.json
src/tomviz_kernels/LabelObjectAttributes.py
src/tomviz_kernels/LabelObjectDistanceFromPrincipalAxis.json
src/tomviz_kernels/LabelObjectDistanceFromPrincipalAxis.py
src/tomviz_kernels/LabelObjectPrincipalAxes.json
src/tomviz_kernels/LabelObjectPrincipalAxes.py
src/tomviz_kernels/LaplaceFilter.json
src/tomviz_kernels/LaplaceFilter.py
src/tomviz_kernels/ManualManipulation.json
src/tomviz_kernels/ManualManipulation.py
src/tomviz_kernels/MedianFilter.json
src/tomviz_kernels/MedianFilter.py
src/tomviz_kernels/NormalizeTiltSeries.json
src/tomviz_kernels/NormalizeTiltSeries.py
src/tomviz_kernels/OtsuMultipleThreshold.json
src/tomviz_kernels/OtsuMultipleThreshold.py
src/tomviz_kernels/Pad_Data.json
src/tomviz_kernels/Pad_Data.py
src/tomviz_kernels/PeronaMalikAnisotropicDiffusion.json
src/tomviz_kernels/PeronaMalikAnisotropicDiffusion.py
src/tomviz_kernels/PoreSizeDistribution.json
src/tomviz_kernels/PoreSizeDistribution.py
src/tomviz_kernels/PowerSpectrumDensity.json
src/tomviz_kernels/PowerSpectrumDensity.py
src/tomviz_kernels/PyStackRegImageAlignment.json
src/tomviz_kernels/PyStackRegImageAlignment.py
src/tomviz_kernels/RandomParticles.json
src/tomviz_kernels/RandomParticles.py
src/tomviz_kernels/Recon_ART.json
src/tomviz_kernels/Recon_ART.py
src/tomviz_kernels/Recon_DFT.json
src/tomviz_kernels/Recon_DFT.py
src/tomviz_kernels/Recon_DFT_constraint.json
src/tomviz_kernels/Recon_DFT_constraint.py
src/tomviz_kernels/Recon_SIRT.json
src/tomviz_kernels/Recon_SIRT.py
src/tomviz_kernels/Recon_TV_minimization.json
src/tomviz_kernels/Recon_TV_minimization.py
src/tomviz_kernels/Recon_WBP.json
src/tomviz_kernels/Recon_WBP.py
src/tomviz_kernels/Recon_tomopy.json
src/tomviz_kernels/Recon_tomopy.py
src/tomviz_kernels/ReinterpretSignedToUnsigned.json
src/tomviz_kernels/ReinterpretSignedToUnsigned.py
src/tomviz_kernels/RemoveArrays.json
src/tomviz_kernels/RemoveArrays.py
src/tomviz_kernels/RemoveBadPixelsTiltSeries.json
src/tomviz_kernels/RemoveBadPixelsTiltSeries.py
src/tomviz_kernels/RemoveLabels.json
src/tomviz_kernels/RemoveLabels.py
src/tomviz_kernels/Resample.json
src/tomviz_kernels/Resample.py
src/tomviz_kernels/Rotate3D.json
src/tomviz_kernels/Rotate3D.py
src/tomviz_kernels/RotationAlign.json
src/tomviz_kernels/RotationAlign.py
src/tomviz_kernels/SAM2Segment3D.json
src/tomviz_kernels/SAM2Segment3D.py
src/tomviz_kernels/SAM3Segment3D.json
src/tomviz_kernels/SAM3Segment3D.py
src/tomviz_kernels/STEM_probe.json
src/tomviz_kernels/STEM_probe.py
src/tomviz_kernels/SegmentParticles.json
src/tomviz_kernels/SegmentParticles.py
src/tomviz_kernels/SegmentPores.json
src/tomviz_kernels/SegmentPores.py
src/tomviz_kernels/SetNegativeVoxelsToZero.json
src/tomviz_kernels/SetNegativeVoxelsToZero.py
src/tomviz_kernels/Shift3D.json
src/tomviz_kernels/Shift3D.py
src/tomviz_kernels/ShiftRotationCenter_tomopy.json
src/tomviz_kernels/ShiftRotationCenter_tomopy.py
src/tomviz_kernels/ShiftTiltSeriesRandomly.json
src/tomviz_kernels/ShiftTiltSeriesRandomly.py
src/tomviz_kernels/Shift_Stack_Uniformly.json
src/tomviz_kernels/Shift_Stack_Uniformly.py
src/tomviz_kernels/SimilarityMetrics.json
src/tomviz_kernels/SimilarityMetrics.py
src/tomviz_kernels/SimulatedLiveAcquisition.json
src/tomviz_kernels/SimulatedLiveAcquisition.py
src/tomviz_kernels/Square_Root_Data.json
src/tomviz_kernels/Square_Root_Data.py
src/tomviz_kernels/Subtract_TiltSer_Background.json
src/tomviz_kernels/Subtract_TiltSer_Background.py
src/tomviz_kernels/Subtract_TiltSer_Background_Auto.json
src/tomviz_kernels/Subtract_TiltSer_Background_Auto.py
src/tomviz_kernels/SwapAxes.json
src/tomviz_kernels/SwapAxes.py
src/tomviz_kernels/TV_Filter.json
src/tomviz_kernels/TV_Filter.py
src/tomviz_kernels/Tortuosity.json
src/tomviz_kernels/Tortuosity.py
src/tomviz_kernels/UnsharpMask.json
src/tomviz_kernels/UnsharpMask.py
src/tomviz_kernels/WienerFilter.json
src/tomviz_kernels/WienerFilter.py
src/tomviz_kernels/__init__.py
src/tomviz_kernels/ctf_correct.json
src/tomviz_kernels/ctf_correct.py
src/tomviz_kernels.egg-info/PKG-INFO
src/tomviz_kernels.egg-info/SOURCES.txt
src/tomviz_kernels.egg-info/dependency_links.txt
src/tomviz_kernels.egg-info/requires.txt
src/tomviz_kernels.egg-info/top_level.txt
tests/test_kernels.py
tests/test_pipeline.py