marimo[lsp,mcp,recommended,sql]>=0.25.0
mlflow[genai]>=3.16.1
fastmcp>=4.0.9
optuna>=5.0.0
pina-mathlab>=0.3.2.post2609
transformers[accelerate,tiktoken]>=5.17.0
authlib>=1.8.0
pillow>=12.3.0
cryptography>=50.0.1
langgraph>=1.2.12
werkzeug>=3.1.8
sqlparse>=0.6.0
diskcache>=5.6.3
protobuf>=6.33.6
python-multipart>=0.0.32
ujson>=6.0.0
pyasn1>=0.6.4
pyjwt>=2.15.0
flask>=3.1.3
gitpython>=3.1.62
httpx2>=2.13.1
httpcore2>=2.13.1
lightning>=2.6.6
aiohttp>=3.14.3
accelerate>=1.15.0
pymdown-extensions>=11.0.2
optuna-integration[pytorch-lightning]>=5.0.0
plotly[express,kaleido]>=7.1.0
pydantic-ai-slim[ag-ui]>=2.49.0
pyyaml>=6.0.3
python-dotenv>=1.2.3
typer>=0.27.2
sympy>=1.14.0
meshio>=5.3.5
fasta2a>=2.0.1

[all]
torch>=2.14.0
torch-geometric>=2.8.0.post1
