AUTHORS.rst
CONTRIBUTING.rst
HISTORY.rst
LICENSE
MANIFEST.in
README.rst
pyproject.toml
setup.cfg
setup.py
biolmai/__init__.py
biolmai/biolmai.py
biolmai/cli.py
biolmai/cli_entry.py
biolmai/client.py
biolmai/datasets_mlflow.py
biolmai/examples.py
biolmai/ltc.py
biolmai/models.py
biolmai/progress.py
biolmai/protocols.py
biolmai/protocols_mlflow.py
biolmai/volumes.py
biolmai/workspaces.py
biolmai.egg-info/PKG-INFO
biolmai.egg-info/SOURCES.txt
biolmai.egg-info/dependency_links.txt
biolmai.egg-info/entry_points.txt
biolmai.egg-info/not-zip-safe
biolmai.egg-info/requires.txt
biolmai.egg-info/top_level.txt
biolmai/core/__init__.py
biolmai/core/asynch.py
biolmai/core/auth.py
biolmai/core/const.py
biolmai/core/expression_evaluator.py
biolmai/core/http.py
biolmai/core/payloads.py
biolmai/core/seqflow_auth.py
biolmai/core/utils.py
biolmai/core/validate.py
biolmai/core/legacy/__init__.py
biolmai/core/legacy/api.py
biolmai/core/legacy/cls.py
biolmai/io/__init__.py
biolmai/io/csv.py
biolmai/io/fasta.py
biolmai/io/json.py
biolmai/io/pdb.py
docs/Makefile
docs/authoring-guide.rst
docs/conf.py
docs/index.rst
docs/make.bat
docs/_static/api_reference_icon.png
docs/_static/biolm_docs_logo_dark.png
docs/_static/biolm_docs_logo_light.png
docs/_static/biolm_logomark_transparent.png
docs/_static/biolm_logomark_transparent_for_dark.png
docs/_static/chat_agents_icon.png
docs/_static/jupyter_notebooks_icon.png
docs/_static/model_docs_icon.png
docs/_static/python_sdk_icon.png
docs/_static/tutorials_icon.png
docs/api-reference/biolmai.core.legacy.rst
docs/api-reference/biolmai.core.rst
docs/api-reference/biolmai.io.rst
docs/api-reference/biolmai.rst
docs/api-reference/index.rst
docs/api-reference/modules.rst
docs/cli/dataset.rst
docs/cli/login.rst
docs/cli/logout.rst
docs/cli/model.rst
docs/cli/overview.rst
docs/cli/protocol.rst
docs/cli/reference.rst
docs/cli/status.rst
docs/cli/workspace.rst
docs/cli/usage/authenticating.rst
docs/cli/usage/datasets.rst
docs/cli/usage/models.rst
docs/cli/usage/protocols.rst
docs/cli/usage/workspaces.rst
docs/getting-started/authentication.rst
docs/getting-started/concepts.rst
docs/getting-started/installation.rst
docs/getting-started/overview.rst
docs/getting-started/quickstart.rst
docs/protocols/about.rst
docs/protocols/execution.rst
docs/protocols/inputs.rst
docs/protocols/output.rst
docs/protocols/schema.rst
docs/protocols/tasks.rst
docs/resources/rest-api.rst
docs/sdk/faq.rst
docs/sdk/io.rst
docs/sdk/models.rst
docs/sdk/overview.rst
docs/sdk/protocols.rst
docs/sdk/volumes.rst
docs/sdk/workspaces.rst
docs/sdk/api-reference/index.rst
docs/sdk/usage/async-sync.rst
docs/sdk/usage/batching.rst
docs/sdk/usage/error-handling.rst
docs/sdk/usage/io.rst
docs/sdk/usage/rate_limiting.rst
docs/sdk/usage/usage.rst
docs/tutorials_use_cases/notebooks.rst
tests/__init__.py
tests/test_abatch_calls.py
tests/test_aclient.py
tests/test_auth_integration.py
tests/test_batch_error_retry.py
tests/test_batch_errors.py
tests/test_biolmai.py
tests/test_cli_model_io.py
tests/test_cli_model_list.py
tests/test_cli_model_run.py
tests/test_cli_model_show.py
tests/test_client.py
tests/test_concurrent_batches.py
tests/test_datasets_mlflow.py
tests/test_example_generation.py
tests/test_integration.py
tests/test_io.py
tests/test_iterables.py
tests/test_jupyter_context.py
tests/test_max_items.py
tests/test_oauth_auth.py
tests/test_progress.py
tests/test_protocols.py
tests/test_protocols_mlflow.py
tests/test_rate_limit.py
tests/test_schemas.py
tests/fixtures/generate_input.json
tests/fixtures/generate_input_antifold.json
tests/fixtures/generate_input_prompt.json
tests/fixtures/generate_input_sequence.json
tests/fixtures/generate_input_sequence_clean.json
tests/fixtures/multi_model.pdb
tests/fixtures/sample.csv
tests/fixtures/sample.fasta
tests/fixtures/sample.pdb