GimmeMotifs v{{version}}

{% for motif in motifs %}

{{motif.id}} ({{motif.best}})

Motif and consensus

	{{motif.match_id}} {{motif.match_pval}}
{{motif.consensus}}	Database match

Significance and enrichment

{% set bg_types = motif.bg.keys() %} {% for i in range(0, motif.bg.keys()|length, 2) %} {% endfor %}

{% for j in range(2) %} {% endfor %} {% for j in range(2) %} {% endfor %} {% if i + j < motif.bg.keys()|length %} {% endif %} {% if i + j < motif.bg.keys()|length %} {{ bg_types[i + j] }} enrichment {{motif.bg[bg_types[i + j]]['e']}} p-value {{motif.bg[bg_types[i + j]]['p']}} ROC_AUC {{motif.bg[bg_types[i + j]]['auc']}} MNCP {{motif.bg[bg_types[i + j]]['mncp']}} {% endif %}

Positional Preference Plot

(Fullscreen)

{% endfor %}

Result Files

• Results
• Results (.tsv)
• Cluster report
• Weight matrices
• Parameters
• Log

Identified Motifs

{% for motif in motifs %}
• {{motif.id}} {% for i in range(motif.stars|int) %} {% endfor %}
{% endfor %}

Reference

Please cite:
van Heeringen, SJ and Veenstra, GJC, Bioinformatics.