LICENSE
README.md
pyproject.toml
setup.py
napxplorer/__init__.py
napxplorer/__version__.py
napxplorer/doctor.py
napxplorer.egg-info/PKG-INFO
napxplorer.egg-info/SOURCES.txt
napxplorer.egg-info/dependency_links.txt
napxplorer.egg-info/entry_points.txt
napxplorer.egg-info/requires.txt
napxplorer.egg-info/top_level.txt
napxplorer/core/__init__.py
napxplorer/core/base.py
napxplorer/core/capabilities.py
napxplorer/core/component.py
napxplorer/core/constants.py
napxplorer/core/exceptions.py
napxplorer/core/logger.py
napxplorer/core/metadata.py
napxplorer/core/registry.py
napxplorer/core/requirements.py
napxplorer/core/settings.py
napxplorer/core/typing.py
napxplorer/data/__init__.py
napxplorer/data/ch_isolated_pi.json
napxplorer/data/electrostatic.json
napxplorer/data/interaction_caps_xtb_modified_v2.py
napxplorer/data/mmcif_clean_reader.py
napxplorer/data/naxplorer_additional_pi_defs.json
napxplorer/data/renaming.py
napxplorer/data/rna_residue_defs.json
napxplorer/data/surface.xyz
napxplorer/data/weak_ch_donor.json
napxplorer/helper_coco2/gen_coco2_json_input.py
napxplorer/interactions/__init__.py
napxplorer/interactions/run_clapnac_sweep.py
napxplorer/interactions/run_coco2_parallel.py
napxplorer/interactions/run_napxplorer_parallel.py
napxplorer/interactions/run_snap_parallel.py
napxplorer/models/data.py
napxplorer/modifications/NAPxplorer_modifications_interactions.py
napxplorer/modifications/__init__.py
napxplorer/modifications/build_webpage_assets.py
napxplorer/modifications/catalog.py
napxplorer/modifications/ccd_parser.py
napxplorer/modifications/describe.py
napxplorer/modifications/fetch_modified_nucleotides_data.py
napxplorer/modifications/fetch_modified_structures.py
napxplorer/modifications/interaction_rules.py
napxplorer/modifications/panel_builder.py
napxplorer/modifications/pdb_metadata.py
napxplorer/modifications/plot_parent_base_to_modified_nucleotides.py
napxplorer/modifications/refresh_catalog_status.py
napxplorer/modifications/registry.py
napxplorer/modifications/render_representatives.py
napxplorer/modifications/renderer_2d.py
napxplorer/modifications/representatives.py
napxplorer/modifications/run_all_modified_structures_gxtb.py
napxplorer/modifications/run_pipeline.py
napxplorer/parsers/NAPxplorer_parser.py
napxplorer/parsers/NAenergy.py
napxplorer/parsers/NAwrapping.py
napxplorer/parsers/__init__.py
napxplorer/parsers/base.py
napxplorer/parsers/bpfind.py
napxplorer/parsers/claPNAC.py
napxplorer/parsers/coco2.py
napxplorer/parsers/dssr.py
napxplorer/parsers/extractElements_PDB_CIF.py
napxplorer/parsers/hbplus.py
napxplorer/parsers/mmcifReader.py
napxplorer/parsers/naccess.py
napxplorer/parsers/pymolParser.py
napxplorer/parsers/snap.py
napxplorer/plugins/PyMol_render_figures.py
napxplorer/utils/mmcif_clean_reader.py
napxplorer/utils/renaming.py
napxplorer/visualization/__init__.py
napxplorer/visualization/chimerax_renderer.py
napxplorer/visualization/colors.py
napxplorer/visualization/generate_previews.py
napxplorer/visualization/molstar_renderer.py
napxplorer/visualization/ngl_renderer.py
napxplorer/visualization/presets.py
napxplorer/visualization/profile.py
napxplorer/visualization/pymol_renderer.py
napxplorer/visualization/pymol_utils.py
napxplorer/visualization/registry.py
napxplorer/visualization/renderer.py
napxplorer/visualization/styles.py
napxplorer/visualization/use.py
scripts/NAPxplorer.py
scripts/__init__.py