
VALIDATION REPORT
eva-sub-cli vcligeneratedversion
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PROJECT SUMMARY
General details about the project
	Project Title: My cool project
	Validation Date: 2023-08-31 12:34:56
	Submission Directory: /test/submission/dir
    Note for human genotype data:
        You will need to provide a signed copy of our Consent Statement (https://docs.google.com/document/d/1UaRmimAe919IZYIH55mDXMe-4sHsRVqaP4moqx2IYE4) via email to eva-helpdesk@ebi.ac.uk after submission.
        Your submission will only be processed after receiving the consent statement.For more info, please see our help section (https://www.ebi.ac.uk/eva/?Help#submissionPanel&link=consent-statement-for-human-genotype-data).
	Files mapping:
		---
		VCF File: input_fail.vcf
		Fasta File: input_fail.fa
		Analysis: A
		---
		VCF File: input_pass.vcf
		Fasta File: input_pass.fa
		Analysis: B
		---
		VCF File: input_test.vcf
		Fasta File: input_test.fa
		Analysis: could not be linked
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METADATA VALIDATION RESULTS
Ensures that required fields are present and values are formatted correctly.
For requirements, please refer to the EVA website (https://www.ebi.ac.uk/eva/?Submit-Data).
❗ Metadata check did not complete successfully. Check the logs for more information.
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VCF VALIDATION RESULTS
Checks whether each file is compliant with the VCF specification (http://samtools.github.io/hts-specs/VCFv4.4.pdf).
Also checks whether the variants' reference alleles match against the reference assembly.
    ASSEMBLY CHECK
❗ Assembly check did not complete successfully. Check the logs for more information.
    VCF CHECK
❗ VCF check did not complete successfully. Check the logs for more information.
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SAMPLE NAME CONCORDANCE CHECK
Checks whether information in the metadata is concordant with that contained in the VCF files, in particular sample names.
❗ Sample name concordance did not complete successfully. Check the logs for more information.
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REFERENCE GENOME INSDC CHECK
Checks that the reference sequences in the FASTA file used to call the variants are accessioned in INSDC.
Also checks if the reference assembly accession in the metadata matches the one determined from the FASTA file.
❗ INSDC check did not complete successfully. Check the logs for more information.
