numpy>=1.23
pandas>=2.2.2
matplotlib>=3.9
biopython>=1.84
seqmat>=1.3
huggingface_hub>=0.20

[all]
torch>=2.0
openspliceai
einops

[dev]
pytest>=7
pytest-cov
ruff

[docs]
mkdocs-material>=9.5
mkdocstrings[python]>=0.24
pymdown-extensions>=10

[openspliceai]
torch>=2.0
openspliceai

[pangolin]
torch>=2.0

[protein]
geney>=2.0

[spliceai_keras]
tensorflow>=2.8
spliceai

[spliceai_pytorch]
torch>=2.0

[spliceformer]
torch>=2.0
einops
