biopython>=1.83
networkx>=3.3
graphviz>=0.20.3
pydot>=3.0.4
click>=8.0.0
requests>=2.25.0
tqdm>=4.60.0

[dev]
kegg_pathways_completeness[test]
pre-commit==3.8.0
black==24.8.0
flake8==7.1.1
pep8-naming==0.14.1

[test]
pytest==8.2.2
pytest-workflow==2.1.0
pytest-md==0.2.0
