4.0.1: deploy test.
4.0.0:
 Users:
  - Protocols unified into a single one.
  - Add excluded views management.
 Developers:
  - Fix test, relax installation requirements for folders or libraries, fix output tomo sampling
  - Fix streaming condition to insert the closing step. Now it uses collections.Counter when comparing
    the tsId lists instead of direct comparison, which is order-sensitive.
3.2.1: Adding a main help to the protocols and some minor modifications in the helps of the parameters
3.2: refactoring of both protocols
3.1.3: do not trigger reconstruction protocol, add possible outputs
3.1.2: fix tlt and defocus files do not correspond to the tilt series
3.1.1: fix reconstruction protocol trigger if no alignment exists
3.1:
- fix defocus shift: should be passed in a file for ctf correction, and as a param for reconstruction
- add gold erasing option
- stack is aligned after ctf correction
- fix test tilt axis value
- add astigmatism validation
- do not create new TomoAcquisition object
- use mrc extension for all files
