torch<3,>=2.1
numpy>=1.24
scipy>=1.10
pandas>=2.0
pyyaml>=6.0
scikit-learn>=1.3
matplotlib>=3.7
tqdm>=4.65
requests>=2.28
scanpy>=1.9
decoupler>=1.4
anndata>=0.9

[all]
regstatusnet[dev,docs,viz]

[dev]
pytest>=7.0
pytest-cov
nbconvert
ipykernel

[docs]
sphinx>=7.0
furo>=2024.1
nbsphinx>=0.9
myst-parser>=2.0
sphinx-copybutton>=0.5

[viz]
umap-learn>=0.5
