LICENSE
MANIFEST.in
README.md
pyproject.toml
examples/conflicting_trees.newick
examples/double_conflict.newick
examples/figure1_clusters.txt
examples/independent_conflicts.newick
examples/partial_trees.newick
examples/plot_network.py
examples/three_trees.newick
examples/two_trees.newick
src/phylocass/__init__.py
src/phylocass/__main__.py
src/phylocass/cass.py
src/phylocass/cli.py
src/phylocass/clusters.py
src/phylocass/io.py
src/phylocass/plot.py
src/phylocass/py.typed
src/phylocass/treebuild.py
src/phylocass/workgraph.py
src/phylocass/zclosure.py
src/phylocass.egg-info/PKG-INFO
src/phylocass.egg-info/SOURCES.txt
src/phylocass.egg-info/dependency_links.txt
src/phylocass.egg-info/entry_points.txt
src/phylocass.egg-info/requires.txt
src/phylocass.egg-info/top_level.txt
tests/conftest.py
tests/test_cass.py
tests/test_cli.py
tests/test_clusters.py
tests/test_display_trees.py
tests/test_examples.py
tests/test_io.py
tests/test_plot.py
tests/test_workgraph.py
tests/test_zclosure.py