Index

A

add() (gc3libs.dag.TaskCollection method) add_params() (gc3libs.authentication.Auth method) adjoin() (gc3libs.url.Url method) API append() (gc3libs.utils.Log method) Application (class in gc3libs) AppPotApplication (class in gc3libs.application.apppot)

ARC_CACHE_TIME (gc3libs.Default attribute) ArcLrms (class in gc3libs.backends.arc0) attach() (gc3libs.dag.TaskCollection method) (gc3libs.Task method) Auth (class in gc3libs.authentication) authenticated() (gc3libs.backends.LRMS static method) AuthError

B

backup() (in module gc3libs.utils) basename_sans() (in module gc3libs.utils)

bsub() (gc3libs.Application method) (gc3libs.application.gamess.GamessAppPotApplication method) (gc3libs.application.gamess.GamessApplication method)

C

cache_for() (in module gc3libs.utils) cancel_job() (gc3libs.backends.arc0.ArcLrms method) (gc3libs.backends.LRMS method) cat() (in module gc3libs.utils) close() (gc3libs.backends.arc0.ArcLrms method) (gc3libs.backends.LRMS method) cmdline() (gc3libs.Application method) (gc3libs.application.gamess.GamessAppPotApplication method) Command-line Command-line option compatible_resources() (gc3libs.Application method)

ConfigurationError configure_logger() (in module gc3libs) copy() (gc3libs.utils.Struct method) copy_recursively() (in module gc3libs.utils) copyfile() (in module gc3libs.utils) copytree() (in module gc3libs.utils) Core count() (in module gc3libs.utils)

D

DataStagingError Default (class in gc3libs) defproperty() (in module gc3libs.utils) deploy_configuration_file() (in module gc3libs.utils)

detach() (gc3libs.Task method) DetachedFromGridError dirname() (in module gc3libs.utils) DuplicateEntryError

E

Enum (class in gc3libs.utils) Error

exitcode (gc3libs.Run attribute) expansions() (gc3libs.template.Template method) (in module gc3libs.template)

F

FatalError fetch_output() (gc3libs.Task method) fetch_output_error() (gc3libs.Application method)

first() (in module gc3libs.utils) free() (gc3libs.backends.arc0.ArcLrms method) (gc3libs.Task method) (gc3libs.backends.LRMS method) from_template() (in module gc3libs.utils)

G

GamessApplication (class in gc3libs.application.gamess) GamessAppPotApplication (class in gc3libs.application.gamess) gc3libs (module) gc3libs.application (module) gc3libs.application.apppot (module) gc3libs.application.gamess (module) gc3libs.application.rosetta (module) gc3libs.authentication (module) gc3libs.authentication.grid (module) gc3libs.authentication.ssh (module) gc3libs.backends (module) gc3libs.backends.arc0 (module)

gc3libs.dag (module) gc3libs.exceptions (module) gc3libs.persistence (module) gc3libs.template (module) gc3libs.url (module) gc3libs.utils (module) gc3utils (module) gc3utils.frontend (module) get() (gc3libs.authentication.Auth method) get_resource_status() (gc3libs.backends.arc0.ArcLrms method) (gc3libs.backends.LRMS method) get_results() (gc3libs.backends.arc0.ArcLrms method) (gc3libs.backends.LRMS method) getattr_nested() (in module gc3libs.utils)

I

ifelse() (in module gc3libs.utils) in_state() (gc3libs.Run method) info (gc3libs.Run attribute) InputFileError InternalError InvalidArgument

InvalidOperation InvalidResourceName InvalidType InvalidUsage InvalidValue irange() (in module gc3libs.utils)

J

Job

K

kill() (gc3libs.dag.ParallelTaskCollection method) (gc3libs.Task method) (gc3libs.dag.SequentialTaskCollection method)

L

last() (gc3libs.utils.Log method) LoadError lock() (in module gc3libs.utils)

Log (class in gc3libs.utils) LRMS (class in gc3libs.backends)

M

main() (in module gc3utils.frontend) mkdir() (in module gc3libs.utils)

mkdir_with_backup() (in module gc3libs.utils)

N

new() (gc3libs.Task method) next() (gc3libs.dag.SequentialTaskCollection method) NoConfigurationFile

NoneAuth (class in gc3libs.authentication) NoResources

O

OutputNotAvailableError

P

ParallelTaskCollection (class in gc3libs.dag) peek() (gc3libs.backends.arc0.ArcLrms method) (gc3libs.Task method) (gc3libs.backends.LRMS method) (gc3libs.dag.TaskCollection method) Persistent PlusInfinity (class in gc3libs.utils) prettyprint() (in module gc3libs.utils)

progress() (gc3libs.dag.ParallelTaskCollection method) (gc3libs.Task method) (gc3libs.dag.SequentialTaskCollection method) progressive_number() (in module gc3libs.utils) PROXY_VALIDITY_THRESHOLD (gc3libs.Default attribute) Python Enhancement Proposals PEP 8

Q

qgms() (gc3libs.application.gamess.GamessApplication method) qsub_pbs() (gc3libs.Application method) (gc3libs.application.gamess.GamessAppPotApplication method) (gc3libs.application.gamess.GamessApplication method)

qsub_sge() (gc3libs.Application method) (gc3libs.application.gamess.GamessAppPotApplication method) (gc3libs.application.gamess.GamessApplication method)

R

rank_resources() (gc3libs.Application method) read_contents() (in module gc3libs.utils) RecoverableDataStagingError RecoverableError remove() (gc3libs.dag.TaskCollection method) Resource retry() (gc3libs.RetryableTask method)

RetryableTask (class in gc3libs) returncode (gc3libs.Run attribute) RosettaApplication (class in gc3libs.application.rosetta) RosettaDockingApplication (class in gc3libs.application.rosetta) Run (class in gc3libs) Run.Arch (class in gc3libs) running() (gc3libs.Task method)

S

safe_repr() (in module gc3libs.utils) same_docstring_as() (in module gc3libs.utils) samefile() (in module gc3libs.utils) SequentialTaskCollection (class in gc3libs.dag) Session shellexit_to_returncode() (gc3libs.Run static method) signal (gc3libs.Run attribute) Singleton (class in gc3libs.utils) StagedTaskCollection (class in gc3libs.dag) State state (gc3libs.Run attribute)

stats() (gc3libs.dag.TaskCollection method) stopped() (gc3libs.Task method) string_to_boolean() (in module gc3libs.utils) stripped() (in module gc3libs.utils) Struct (class in gc3libs.utils) submit() (gc3libs.dag.ParallelTaskCollection method) (gc3libs.Task method) (gc3libs.dag.SequentialTaskCollection method) submit_error() (gc3libs.Application method) submit_job() (gc3libs.backends.arc0.ArcLrms method) (gc3libs.backends.LRMS method) submitted() (gc3libs.Task method) substitute() (gc3libs.template.Template method)

T

Task (class in gc3libs) TaskCollection (class in gc3libs.dag) TaskError Template (class in gc3libs.template)

terminated() (gc3libs.application.gamess.GamessApplication method) (gc3libs.Task method) (gc3libs.application.rosetta.RosettaApplication method) terminating() (gc3libs.Task method) test_file() (in module gc3libs.utils) to_bytes() (in module gc3libs.utils)

U

UnexpectedStateError uniq() (in module gc3libs.utils) unknown() (gc3libs.Task method) UnknownJob UnknownJobState unlock() (in module gc3libs.utils) UnrecoverableDataStagingError

UnrecoverableError update_job_state() (gc3libs.backends.arc0.ArcLrms method) (gc3libs.backends.LRMS method) update_job_state_error() (gc3libs.Application method) update_state() (gc3libs.dag.ParallelTaskCollection method) (gc3libs.RetryableTask method) (gc3libs.Task method) (gc3libs.dag.SequentialTaskCollection method) (gc3libs.dag.TaskCollection method) Url (class in gc3libs.url) UrlKeyDict (class in gc3libs.url) UrlValueDict (class in gc3libs.url)

V

validate_data() (gc3libs.backends.arc0.ArcLrms method) (gc3libs.backends.LRMS method)

W

wait() (gc3libs.dag.TaskCollection method) (gc3libs.Task method) Walltime

write_contents() (in module gc3libs.utils)

X

xrsl() (gc3libs.Application method)