AUTHORS.rst
CONTRIBUTING.rst
LICENSE
README.rst
pyproject.toml
docs/Makefile
docs/make.bat
docs/source/authors.rst
docs/source/changelog.rst
docs/source/citations.rst
docs/source/conf.py
docs/source/contributing.rst
docs/source/datasets.rst
docs/source/functions.rst
docs/source/index.rst
docs/source/installation.rst
docs/source/output.rst
docs/source/usage.rst
gunc/__init__.py
gunc/checkm_merge.py
gunc/external_tools.py
gunc/get_scores.py
gunc/gunc.py
gunc/gunc_database.py
gunc/visualisation.py
gunc.egg-info/PKG-INFO
gunc.egg-info/SOURCES.txt
gunc.egg-info/dependency_links.txt
gunc.egg-info/entry_points.txt
gunc.egg-info/requires.txt
gunc.egg-info/top_level.txt
gunc/data/genome2taxonomy_gtdb214ref.tsv
gunc/data/genome2taxonomy_gtdb95ref.tsv
gunc/data/genome2taxonomy_pg2.1ref.tsv
gunc/data/genome2taxonomy_pg3ref.tsv
gunc/data/template.html
gunc/tests/__init__.py
gunc/tests/conftest.py
gunc/tests/test_external_tools.py
gunc/tests/test_get_scores.py
gunc/tests/test_gunc.py
gunc/tests/test_gunc_database.py
gunc/tests/test_visualisation.py
gunc/tests/test_data/test_genome.fa.diamond.out
gunc/tests/test_data/test_genome.fa.diamond.out.chimerism_scores
gunc/tests/test_data/test_genome.fa.genecalls.faa
gunc/tests/test_data/test_genome.fa.gz
gunc/tests/test_data/tiny_test.base_data
gunc/tests/test_data/tiny_test.chimerism_scores
gunc/tests/test_data/tiny_test.diamond.out
gunc/tests/test_data/tiny_test.faa.gz
gunc/tests/test_data/tiny_test.gene_counts.json