LICENSE
MANIFEST.in
README.md
requirements-levenshtein.txt
requirements.txt
setup.cfg
setup.py
ngs_tools/__init__.py
ngs_tools/bam.py
ngs_tools/logging.py
ngs_tools/progress.py
ngs_tools/sequence.py
ngs_tools/utils.py
ngs_tools.egg-info/PKG-INFO
ngs_tools.egg-info/SOURCES.txt
ngs_tools.egg-info/dependency_links.txt
ngs_tools.egg-info/not-zip-safe
ngs_tools.egg-info/requires.txt
ngs_tools.egg-info/top_level.txt
ngs_tools/binary/Argument.py
ngs_tools/binary/ArgumentValidator.py
ngs_tools/binary/Binary.py
ngs_tools/binary/__init__.py
ngs_tools/chemistry/Chemistry.py
ngs_tools/chemistry/MultimodalChemistry.py
ngs_tools/chemistry/SingleCellChemistry.py
ngs_tools/chemistry/SpatialChemistry.py
ngs_tools/chemistry/__init__.py
ngs_tools/chemistry/whitelists/.DS_Store
ngs_tools/chemistry/whitelists/10x_atac_whitelist.txt.gz
ngs_tools/chemistry/whitelists/10x_fb_whitelist.txt.gz
ngs_tools/chemistry/whitelists/10x_multiome_atac_whitelist.txt.gz
ngs_tools/chemistry/whitelists/10x_multiome_gex_whitelist.txt.gz
ngs_tools/chemistry/whitelists/10x_version1_whitelist.txt.gz
ngs_tools/chemistry/whitelists/10x_version2_whitelist.txt.gz
ngs_tools/chemistry/whitelists/10x_version3_whitelist.txt.gz
ngs_tools/chemistry/whitelists/10x_version4_whitelist.txt.gz
ngs_tools/chemistry/whitelists/BDWTA_whitelist.txt.gz
ngs_tools/chemistry/whitelists/indrops_version3_whitelist.txt.gz
ngs_tools/chemistry/whitelists/sci_fate_whitelist.txt.gz
ngs_tools/chemistry/whitelists/splitseq_version2_whitelist.txt.gz
ngs_tools/chemistry/whitelists/visium_whitelist.txt.gz
ngs_tools/fasta/Fasta.py
ngs_tools/fasta/FastaEntry.py
ngs_tools/fasta/__init__.py
ngs_tools/fastq/Fastq.py
ngs_tools/fastq/Read.py
ngs_tools/fastq/__init__.py
ngs_tools/gtf/Gtf.py
ngs_tools/gtf/GtfEntry.py
ngs_tools/gtf/Segment.py
ngs_tools/gtf/SegmentCollection.py
ngs_tools/gtf/__init__.py
tests/test_bam.py
tests/test_binary.py
tests/test_chemistry.py
tests/test_fasta.py
tests/test_fastq.py
tests/test_gtf.py
tests/test_sequence.py
tests/test_utils.py