Configuration
Instrument Settings
Quantification
Run Quantification? (only possible if RAW files have been uploaded). |
Use NetMHCpan Binding affinity?
As a feature for assignment (best for mono-allelic immunopeptidome data): | |
In reporting after assignment (best for multi-allelic immunopeptidome data): |
Filter epitope candidates based on:
Peptide level probailities: | |
PSM level probailities: |
File Specific Information
Additional Settings.
Config Key | Config Setting | |