.gitignore
.readthedocs.yaml
LICENSE
README.md
mkdocs.yml
pyproject.toml
docs/CHANGELOG.md
docs/classifier.md
docs/index.md
docs/install.md
docs/plotting.md
docs/refs.md
docs/training_data.md
docs/utils.md
docs/img/logo.png
docs/img/logoGlow.png
docs/img/pyscn_diagram.png
docs/javascripts/extra.js
docs/notebooks/categorize.ipynb
docs/notebooks/eb_diagram.png
docs/notebooks/quickstart.ipynb
docs/notebooks/img/categories.jpg
docs/notebooks/img/eb_diagram.png
docs/stylesheets/extra.css
src/pySingleCellNet/__init__.py
src/pySingleCellNet/_version.py
src/pySingleCellNet/config.py
src/pySingleCellNet.egg-info/PKG-INFO
src/pySingleCellNet.egg-info/SOURCES.txt
src/pySingleCellNet.egg-info/dependency_links.txt
src/pySingleCellNet.egg-info/requires.txt
src/pySingleCellNet.egg-info/top_level.txt
src/pySingleCellNet/classify/__init__.py
src/pySingleCellNet/classify/categorize.py
src/pySingleCellNet/classify/classifier.py
src/pySingleCellNet/classify/comparison.py
src/pySingleCellNet/classify/rank_class.py
src/pySingleCellNet/old/oldFunctions.py
src/pySingleCellNet/old/old_scn_train.py
src/pySingleCellNet/old/oldpostclass.py.py
src/pySingleCellNet/old/postclass_analysis.py
src/pySingleCellNet/old/scn_assess.py
src/pySingleCellNet/old/scn_train.py
src/pySingleCellNet/old/stats.py
src/pySingleCellNet/old/tsp_rf.py
src/pySingleCellNet/plotting/__init__.py
src/pySingleCellNet/plotting/bar.py
src/pySingleCellNet/plotting/dot.py
src/pySingleCellNet/plotting/heatmap.py
src/pySingleCellNet/plotting/helpers.py
src/pySingleCellNet/plotting/scatter.py
src/pySingleCellNet/plotting/spatial.py
src/pySingleCellNet/utils/__init__.py
src/pySingleCellNet/utils/adataTools.py
src/pySingleCellNet/utils/annotation.py
src/pySingleCellNet/utils/cell.py
src/pySingleCellNet/utils/colors.py
src/pySingleCellNet/utils/gene.py
src/pySingleCellNet/utils/qc.py