CODE_OF_CONDUCT.md
LICENSE
MANIFEST.in
README.md
pyproject.toml
setup.cfg
mupt/__init__.py
mupt/_version.py
mupt/mupt.py
mupt/py.typed
mupt/roles.py
mupt.egg-info/PKG-INFO
mupt.egg-info/SOURCES.txt
mupt.egg-info/dependency_links.txt
mupt.egg-info/not-zip-safe
mupt.egg-info/requires.txt
mupt.egg-info/top_level.txt
mupt/analysis/__init__.py
mupt/builders/__init__.py
mupt/builders/all_atom_dpd.py
mupt/builders/base.py
mupt/builders/dpd.py
mupt/builders/random_walk.py
mupt/chemistry/__init__.py
mupt/chemistry/conversion.py
mupt/chemistry/core.py
mupt/chemistry/linkers.py
mupt/chemistry/peptide.py
mupt/chemistry/rdloggers.py
mupt/chemistry/sanitization.py
mupt/chemistry/smiles.py
mupt/chemistry/stereo.py
mupt/geometry/__init__.py
mupt/geometry/arraytypes.py
mupt/geometry/lattices.py
mupt/geometry/measure.py
mupt/geometry/coordinates/__init__.py
mupt/geometry/coordinates/basis.py
mupt/geometry/coordinates/directions.py
mupt/geometry/coordinates/local.py
mupt/geometry/coordinates/reference.py
mupt/geometry/shapes/__init__.py
mupt/geometry/shapes/cylinder.py
mupt/geometry/shapes/ellipsoid.py
mupt/geometry/shapes/pointcloud.py
mupt/geometry/shapes/shapes.py
mupt/geometry/shapes/visualize.py
mupt/geometry/transforms/__init__.py
mupt/geometry/transforms/linear.py
mupt/geometry/transforms/affine/__init__.py
mupt/geometry/transforms/affine/application.py
mupt/geometry/transforms/affine/homogeneous.py
mupt/geometry/transforms/affine/matrices.py
mupt/geometry/transforms/rigid/__init__.py
mupt/geometry/transforms/rigid/alignment.py
mupt/geometry/transforms/rigid/application.py
mupt/geometry/transforms/rigid/rotations.py
mupt/interfaces/__init__.py
mupt/interfaces/smiles.py
mupt/interfaces/_shared/__init__.py
mupt/interfaces/_shared/topology.py
mupt/interfaces/mdanalysis/__init__.py
mupt/interfaces/mdanalysis/exporters.py
mupt/interfaces/mdanalysis/strategies.py
mupt/interfaces/rdkit/__init__.py
mupt/interfaces/rdkit/components.py
mupt/interfaces/rdkit/depiction.py
mupt/interfaces/rdkit/exporters.py
mupt/interfaces/rdkit/importers.py
mupt/interfaces/rdkit/labelling.py
mupt/interfaces/rdkit/rdprops.py
mupt/interfaces/rdkit/selection.py
mupt/interfaces/rdkit/strategies.py
mupt/muffin/__init__.py
mupt/mupr/__init__.py
mupt/mupr/canonicalize.py
mupt/mupr/connection.py
mupt/mupr/embedding.py
mupt/mupr/primitives.py
mupt/mupr/properties.py
mupt/mupr/topology.py
mupt/mutils/__init__.py
mupt/mutils/comparison.py
mupt/mutils/containers.py
mupt/mutils/copyable.py
mupt/mutils/iteration.py
mupt/mutils/setutils.py
mupt/mutils/decorators/__init__.py
mupt/mutils/decorators/classmod.py
mupt/mutils/decorators/functional.py
mupt/mutils/decorators/meta.py
mupt/mutils/decorators/signatures.py
mupt/mutils/filepaths/__init__.py
mupt/mutils/filepaths/pathutils.py
mupt/reactions/__init__.py
mupt/temporary/__init__.py
mupt/temporary/sdf.py
mupt/tests/__init__.py
mupt/tests/conftest.py
mupt/tests/test_mupt.py
mupt/tests/builders/__init__.py
mupt/tests/builders/test_all_atom_dpd.py
mupt/tests/chemistry/__init__.py
mupt/tests/chemistry/test_conversion.py
mupt/tests/chemistry/test_sanitization.py
mupt/tests/chemistry/test_valence.py
mupt/tests/geometry/__init__.py
mupt/tests/geometry/test_arraytypes.py
mupt/tests/geometry/test_basis.py
mupt/tests/geometry/test_directions.py
mupt/tests/geometry/test_homogeneous.py
mupt/tests/geometry/test_measure.py
mupt/tests/geometry/test_rigidly_transformable.py
mupt/tests/geometry/test_shapes.py
mupt/tests/interfaces/__init__.py
mupt/tests/interfaces/test_shared_topology.py
mupt/tests/interfaces/mdanalysis/__init__.py
mupt/tests/interfaces/mdanalysis/test_exporters.py
mupt/tests/interfaces/rdkit/__init__.py
mupt/tests/interfaces/rdkit/test_exporters.py
mupt/tests/interfaces/rdkit/test_importers.py
mupt/tests/interfaces/rdkit/test_labelling.py
mupt/tests/interfaces/rdkit/test_rdprops.py
mupt/tests/mupr/__init__.py
mupt/tests/mupr/test_connection.py
mupt/tests/mutils/__init__.py
mupt/tests/mutils/test_containers.py
mupt/tests/temporary/__init__.py
mupt/tests/temporary/test_sdf.py
mupt/units/__init__.py