LICENSE.txt
README.md
pyproject.toml
src/mdscribe/__init__.py
src/mdscribe.egg-info/PKG-INFO
src/mdscribe.egg-info/SOURCES.txt
src/mdscribe.egg-info/dependency_links.txt
src/mdscribe.egg-info/entry_points.txt
src/mdscribe.egg-info/requires.txt
src/mdscribe.egg-info/top_level.txt
src/mdscribe/amber/__init__.py
src/mdscribe/desmond/__init__.py
src/mdscribe/desmond/cli.py
src/mdscribe/desmond/desmond-md.cfg
src/mdscribe/desmond/desmond-md.msj
src/mdscribe/desmond/desmond-metad.cfg
src/mdscribe/desmond/desmond-metad.msj
src/mdscribe/desmond/desmond-min.cfg
src/mdscribe/desmond/desmond-min.msj
src/mdscribe/desmond/desmond-setup.msj
src/mdscribe/desmond/multisim.py
src/mdscribe/desmond/schrodinger.py
src/mdscribe/desmond/script/batch-amber-setup.py
src/mdscribe/desmond/script/batch-autodock-vina.py
src/mdscribe/desmond/script/batch-desmond-dihedral.py
src/mdscribe/desmond/script/batch-desmond-distance.py
src/mdscribe/desmond/script/batch-desmond-ligrmsd.py
src/mdscribe/desmond/script/batch-desmond-report.py
src/mdscribe/desmond/script/batch-desmond-rg.py
src/mdscribe/desmond/script/batch-mmgbsa.py
src/mdscribe/desmond/script/batch-openmm-md-gbsa.py
src/mdscribe/desmond/script/batch-openmm-md.py
src/mdscribe/desmond/script/md_traj_pca.py
src/mdscribe/helper/__init__.py
src/mdscribe/helper/conserved_water.py
src/mdscribe/helper/coord.py
src/mdscribe/helper/mol2file.py
src/mdscribe/helper/pdb-mcsym.py
src/mdscribe/helper/pdb-merge.py
src/mdscribe/helper/pdbfile.py
src/mdscribe/helper/svg.py
src/mdscribe/openmm/__init__.py
src/mdscribe/openmm/atm.py
src/mdscribe/openmm/config.py
src/mdscribe/openmm/hremd.py
src/mdscribe/openmm/omm.py
src/mdscribe/openmm/prep.py
src/mdscribe/openmm/simulate.py
src/mdscribe/openmm/solvate.py
src/mdscribe/ternary/__init__.py
src/mdscribe/ternary/complex.py
test/test_desmond_multisim.py