Package csb :: Package bio :: Package fragments :: Module isites
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Module isites

source code

I-Sites fragment library APIs.


Warning: This module is no longer developed and is provided as is.

Classes
  ChainSequence
Represents a single PDB chain sequence entry with torsion angles
  Cluster
Object representation of an I-Sites library peptide fragment.
  FragmentMatching
Enumeration of fragment assignment methods
  Hitlist
I-Site instance hitlist.
  ISitesFragmentMatch
  InternalISitesError
  InvalidParadigmError
  Library
Representation of an I-Sites peptide fragment library.
  ProfileMatch
Describes a profile-query match
  ProfileMatches
A collection of profile-database hits.
  ProteinProfile
Describes an I-Sites protein profile/PSSM.
  RepStructureFragment
Container class which describes an I-Sites paradigm structure for a cluster.
Variables
  __package__ = 'csb.bio.fragments'