Index A | C | D | E | G | H | I | L | M | N | P | R | S | T | U | Z A adataviz module adataviz() (in module adataviz) adataviz.plotting module adataviz.tools module adataviz.utils module C cal_stats() (in module adataviz.tools) cal_tpm() (in module adataviz.tools) categorical_scatter() (in module adataviz.plotting) composition() (in module adataviz.tools) continuous_scatter() (in module adataviz.plotting) create_artists() (adataviz.utils.TextWithCircleHandler method) D density_contour() (in module adataviz.utils) despine() (in module adataviz.utils) df2stdout() (in module adataviz.utils) downsample_adata() (in module adataviz.tools) E export_pseudobulk_adata() (in module adataviz.tools) G get_boxplot_data() (in module adataviz.plotting) get_brain_region_structure() (in module adataviz.utils) get_cmap() (in module adataviz.plotting) get_genes_mean_frac() (in module adataviz.plotting) get_obs() (in module adataviz.tools) H has_stats() (in module adataviz.plotting) I interactive_boxplot() (in module adataviz.plotting) interactive_dotHeatmap() (in module adataviz.plotting) interactive_embedding() (in module adataviz.plotting) L level_one_palette() (in module adataviz.utils) load_adata() (in module adataviz.tools) load_color_palette() (in module adataviz.tools) load_obs() (in module adataviz.tools) M main() (in module adataviz) merge_adata_regions() (in module adataviz.tools) module adataviz adataviz.plotting adataviz.tools adataviz.utils mpl_style() (in module adataviz.utils) N normalize_mc_by_cell() (in module adataviz.utils) P parse_gtf() (in module adataviz.utils) parse_json() (in module adataviz.utils) pieplot() (in module adataviz.plotting) plot_cluster() (in module adataviz.plotting) plot_cmap_legend() (in module adataviz.utils) plot_color_dict_legend() (in module adataviz.utils) plot_gene() (in module adataviz.plotting) plot_genes() (in module adataviz.plotting) plot_interacrive_boxplot_from_stats() (in module adataviz.plotting) plot_interactive_boxlot_from_data() (in module adataviz.plotting) plot_marker_legend() (in module adataviz.utils) plot_pseudotime() (in module adataviz.plotting) plot_text_legend() (in module adataviz.utils) prepare_color_palette() (in module adataviz.utils) R read_google_sheet() (in module adataviz.utils) S scrna2pseudobulk() (in module adataviz.tools) serialize() (in module adataviz.utils) show_fig() (in module adataviz.plotting) stacked_barplot() (in module adataviz.plotting) stacked_violinplot() (in module adataviz.plotting) stat_pseudobulk() (in module adataviz.tools) T TextWithCircleHandler (class in adataviz.utils) tight_hue_range() (in module adataviz.utils) U use_scientific_style() (in module adataviz.plotting) Z zoom_ax() (in module adataviz.utils) zoom_min_max() (in module adataviz.utils)