Index

B

binaryClassificationReport() (in module pynir.Calibration)

BS (class in pynir.CalibrationTransfer)

C

calcCriteria() (pynir.FeatureSelection.MSVC method) centralization (class in pynir.Preprocessing) cost_FS_PFCE() (in module pynir.CalibrationTransfer) cost_MT_PFCE() (in module pynir.CalibrationTransfer) cost_NS_PFCE() (in module pynir.CalibrationTransfer)

cost_SS_PFCE() (in module pynir.CalibrationTransfer) crossValidation_predict() (pynir.Calibration.pls method) (pynir.Calibration.plsda method) cutFeature() (pynir.FeatureSelection.MSVC method) cwt (class in pynir.Preprocessing)

D

derivate (class in pynir.Preprocessing)

detect() (pynir.OutlierDection.outlierDection_PLS method)

E

evalCriteria() (pynir.FeatureSelection.MSVC method)

evalFeatures() (pynir.FeatureSelection.MCUVE method) (pynir.FeatureSelection.RT method)

F

fit() (pynir.Calibration.multiClass_to_binaryMatrix method) (pynir.Calibration.pls method) (pynir.Calibration.plsda method) (pynir.CalibrationTransfer.BS method) (pynir.CalibrationTransfer.FS_PFCE method) (pynir.CalibrationTransfer.MT_PFCE method) (pynir.CalibrationTransfer.NS_PFCE method) (pynir.CalibrationTransfer.PDS method) (pynir.CalibrationTransfer.SS_PFCE method) (pynir.CalibrationTransfer.SST method) (pynir.FeatureSelection.MCUVE method) (pynir.FeatureSelection.RT method) (pynir.FeatureSelection.VC method) (pynir.OutlierDection.outlierDection_PLS method) (pynir.Preprocessing.centralization method) (pynir.Preprocessing.msc method) (pynir.Preprocessing.snv method)

fit_transform() (pynir.Preprocessing.centralization method) (pynir.Preprocessing.msc method) (pynir.Preprocessing.snv method) FS_PFCE (class in pynir.CalibrationTransfer)

G

get_confusion_matrix() (pynir.Calibration.lsvc method) (pynir.Calibration.plsda method) (pynir.Calibration.rf method) (pynir.Calibration.svc method) get_optLV() (pynir.Calibration.pls method) (pynir.Calibration.plsda method) get_optParams() (pynir.Calibration.lsvc method) (pynir.Calibration.rf method) (pynir.Calibration.svc method)

get_vip() (pynir.Calibration.pls method) (pynir.Calibration.plsda method) get_windowRange() (pynir.CalibrationTransfer.PDS method) getContinuousWavelet() (pynir.Preprocessing.cwt method) getDiscreteWavelet() (pynir.Preprocessing.cwt method)

L

lsvc (class in pynir.Calibration)

M

MCUVE (class in pynir.FeatureSelection) module pynir pynir.Calibration pynir.CalibrationTransfer pynir.FeatureSelection pynir.OutlierDection pynir.Preprocessing pynir.utils

msc (class in pynir.Preprocessing) MSVC (class in pynir.FeatureSelection) MT_PFCE (class in pynir.CalibrationTransfer) multiClass_to_binaryMatrix (class in pynir.Calibration) multiClassificationReport() (in module pynir.Calibration)

N

NS_PFCE (class in pynir.CalibrationTransfer)

O

outlierDection_PLS (class in pynir.OutlierDection)

P

PDS (class in pynir.CalibrationTransfer) permutation_test() (pynir.Calibration.plsda method) pfce_constr1() (in module pynir.CalibrationTransfer) pfce_constr2() (in module pynir.CalibrationTransfer) pfce_constr3() (in module pynir.CalibrationTransfer) plot_confusion_matrix() (in module pynir.Calibration) plot_HotellingT2_Q() (pynir.OutlierDection.outlierDection_PLS method) plot_prediction() (pynir.Calibration.pls method) plotFeatureSelection() (in module pynir.FeatureSelection) pls (class in pynir.Calibration) plsda (class in pynir.Calibration) predict() (pynir.Calibration.pls method) (pynir.Calibration.plsda method) predict_log_proba() (pynir.Calibration.plsda method)

predict_proba() (pynir.Calibration.plsda method) pynir module pynir.Calibration module pynir.CalibrationTransfer module pynir.FeatureSelection module pynir.OutlierDection module pynir.Preprocessing module pynir.utils module

R

regresssionReport() (in module pynir.Calibration) reTransform() (pynir.Calibration.multiClass_to_binaryMatrix method)

rf (class in pynir.Calibration) RT (class in pynir.FeatureSelection)

S

sampleSplit_KS() (in module pynir.Calibration) sampleSplit_random() (in module pynir.Calibration) SG_filtering (class in pynir.Preprocessing) simpls() (in module pynir.Calibration) simulateNIR() (in module pynir.utils)

simulateNIR_calibrationTransfer() (in module pynir.utils) smooth (class in pynir.Preprocessing) snv (class in pynir.Preprocessing) SS_PFCE (class in pynir.CalibrationTransfer) SST (class in pynir.CalibrationTransfer) svc (class in pynir.Calibration)

T

transform() (pynir.Calibration.multiClass_to_binaryMatrix method) (pynir.Calibration.pls method) (pynir.CalibrationTransfer.BS method) (pynir.CalibrationTransfer.FS_PFCE method) (pynir.CalibrationTransfer.MT_PFCE method) (pynir.CalibrationTransfer.NS_PFCE method) (pynir.CalibrationTransfer.PDS method) (pynir.CalibrationTransfer.SS_PFCE method) (pynir.CalibrationTransfer.SST method)

Transform() (pynir.FeatureSelection.MCUVE method) transform() (pynir.Preprocessing.centralization method) (pynir.Preprocessing.cwt method) (pynir.Preprocessing.derivate method) (pynir.Preprocessing.msc method) (pynir.Preprocessing.SG_filtering method) (pynir.Preprocessing.smooth method) (pynir.Preprocessing.snv method)

V

VC (class in pynir.FeatureSelection)