LICENSE
MANIFEST.in
README.md
pyproject.toml
src/__init__.py
src/grz_cli/__init__.py
src/grz_cli/cli.py
src/grz_cli/constants.py
src/grz_cli/logging_setup.py
src/grz_cli/py.typed
src/grz_cli/transfer.py
src/grz_cli.egg-info/PKG-INFO
src/grz_cli.egg-info/SOURCES.txt
src/grz_cli.egg-info/dependency_links.txt
src/grz_cli.egg-info/entry_points.txt
src/grz_cli.egg-info/requires.txt
src/grz_cli.egg-info/top_level.txt
src/grz_cli/commands/__init__.py
src/grz_cli/commands/archive.py
src/grz_cli/commands/clean.py
src/grz_cli/commands/common.py
src/grz_cli/commands/consent.py
src/grz_cli/commands/decrypt.py
src/grz_cli/commands/download.py
src/grz_cli/commands/encrypt.py
src/grz_cli/commands/list_submissions.py
src/grz_cli/commands/pruefbericht.py
src/grz_cli/commands/submit.py
src/grz_cli/commands/upload.py
src/grz_cli/commands/validate.py
src/grz_cli/models/__init__.py
src/grz_cli/models/config.py
src/grz_cli/progress/__init__.py
src/grz_cli/progress/progress_logging.py
src/grz_cli/progress/states.py
src/grz_cli/utils/__init__.py
src/grz_cli/utils/checksums.py
src/grz_cli/utils/config.py
src/grz_cli/utils/crypt.py
src/grz_cli/utils/io.py
src/grz_cli/utils/paths.py
src/grz_cli/validation/__init__.py
src/grz_cli/validation/bam.py
src/grz_cli/validation/fastq.py
src/grz_cli/workers/__init__.py
src/grz_cli/workers/download.py
src/grz_cli/workers/submission.py
src/grz_cli/workers/upload.py
src/grz_cli/workers/worker.py
tests/test_bam_validation.py
tests/test_cli.py
tests/test_download.py
tests/test_fastq_validation.py
tests/test_file_operations.py
tests/test_file_progress_logging.py
tests/test_parser.py
tests/test_read_multiple_json.py
tests/test_upload.py