LICENSE
README.md
pyproject.toml
src/pcip/__init__.py
src/pcip/__main__.py
src/pcip/api.py
src/pcip/banner.py
src/pcip/cli.py
src/pcip/hierarchy.py
src/pcip/inputs.py
src/pcip/omg_baseline.py
src/pcip/orthology.py
src/pcip/predict.py
src/pcip/program.py
src/pcip/program_learn.py
src/pcip/report.py
src/pcip/resources.py
src/pcip/rplots.py
src/pcip/scoring.py
src/pcip/data/R/scpcip_figures.R
src/pcip/data/configs/predict_flower.yaml
src/pcip/data/configs/predict_leaf.yaml
src/pcip/data/configs/predict_root.yaml
src/pcip/data/configs/predict_seed.yaml
src/pcip/data/dictionaries/flower.yaml
src/pcip/data/dictionaries/leaf.yaml
src/pcip/data/dictionaries/root.yaml
src/pcip/data/dictionaries/seed.yaml
src/scpcip.egg-info/PKG-INFO
src/scpcip.egg-info/SOURCES.txt
src/scpcip.egg-info/dependency_links.txt
src/scpcip.egg-info/entry_points.txt
src/scpcip.egg-info/requires.txt
src/scpcip.egg-info/top_level.txt
tests/test_example.py