dandelion.utilities.to_scirpy

dandelion.utilities.to_scirpy(data, transfer=False)[source]

Converts a Dandelion object to scirpy’s format.

Parameters
  • data (Dandelion) – Dandelion object

  • transfer (bool) – Whether to execute dandelion.tl.transfer() to transfer all data to the anndata.AnnData instance.

Returns

Return type

AnnData object in the format initialized by scirpy.