Logo
  • Overview
  • Installation
  • Required database
  • External softwares
  • Basic requirements
  • Acknowledgements

Tutorial:

  • Pre-processing
  • Filtering
  • Cellranger V4 onwards
  • BCR clustering
  • Interoperability with scirpy
  • dandelion
  • scirpy
  • Visualizing BCR data
  • Calculating diversity and mutation
  • Dandelion class
  • Running from R

API:

  • Preprocessing: pp
  • Preprocessing (external): pp.external
  • Tools: tl
  • Plotting: pl
  • Utilities: utl
  • Dandelion
  • Logging
dandelion
  • »
  • Overview: module code

All modules for which code is available

  • dandelion.logging._logging
  • dandelion.plotting._plotting
  • dandelion.preprocessing._preprocessing
  • dandelion.preprocessing.external._preprocessing
  • dandelion.tools._diversity
  • dandelion.tools._network
  • dandelion.tools._tools
  • dandelion.utilities._core
  • dandelion.utilities._io
  • dandelion.utilities._utilities

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