Welcome to dandelion’s documentation!¶
Tutorial:
API:
- Preprocessing: pp
- dandelion.preprocessing.assign_isotype
- dandelion.preprocessing.assign_isotypes
- dandelion.preprocessing.calculate_threshold
- dandelion.preprocessing.create_germlines
- dandelion.preprocessing.filter_bcr
- dandelion.preprocessing.format_fasta
- dandelion.preprocessing.format_fastas
- dandelion.preprocessing.quantify_mutations
- dandelion.preprocessing.reannotate_genes
- dandelion.preprocessing.reassign_alleles
- Preprocessing (external): pp.external
- dandelion.preprocessing.external.assigngenes_igblast
- dandelion.preprocessing.external.creategermlines
- dandelion.preprocessing.external.makedb_igblast
- dandelion.preprocessing.external.parsedb_heavy
- dandelion.preprocessing.external.parsedb_light
- dandelion.preprocessing.external.recipe_scanpy_qc
- dandelion.preprocessing.external.tigger_genotype
- Tools: tl
- dandelion.tools.clone_centrality
- dandelion.tools.clone_degree
- dandelion.tools.clone_diversity
- dandelion.tools.clone_overlap
- dandelion.tools.clone_rarefaction
- dandelion.tools.clone_size
- dandelion.tools.define_clones
- dandelion.tools.extract_edge_weights
- dandelion.tools.find_clones
- dandelion.tools.generate_network
- dandelion.tools.transfer
- Plotting: pl
- Utilities: utl
- Dandelion
- Logging