Metadata-Version: 2.4
Name: insituTEM
Version: 1.0.1
Summary: A toolbox for processing in situ TEM data
Requires-Python: >=3.9
Description-Content-Type: text/markdown
Requires-Dist: numpy
Requires-Dist: scipy
Requires-Dist: matplotlib
Requires-Dist: pandas
Requires-Dist: tifffile
Requires-Dist: tqdm
Requires-Dist: opencv-python
Requires-Dist: pillow
Requires-Dist: scikit-image
Requires-Dist: moviepy
Requires-Dist: ncempy
Requires-Dist: easygui
Requires-Dist: pystackreg
Requires-Dist: pyside6

# insituTEM

Tools for preprocessing in situ TEM movies.

Author: Meng Li (mona.mengli@gmail.com; mli4@bnl.gov)

## Installation
```bash
pip install insitutem
```
## Module descriptions


### `insitu_IO`

in-situ TEM Toolbox - Input Output

Assembles of functions related to movie input output


### `insitu_Preprocess`

in-situ TEM Toolbox - PreProcess

Assembles of functions related to movie preprocess 


### `insitu_alignment`

in-situ TEM Toolbox - Movie alignment 

Assembles of functions related to movie alignment



### `insitu_DENS`

in-situ TEM Toolbox - DENS holder data process

Assembles of functions related to process raw data by DENS holders



### `insitu_DP`

in-situ TEM Toolbox - Image Data process 

Assembles of functions related to movie data analysis such as plots



### `insitu_Diff`

in-situ TEM Toolbox - Diffraction pattern analysis

Assembles of functions related to process FFT and diffraction patterns



### `insitu_EMraw`

in-situ TEM Toolbox - TEM raw data conversion

Assembles of functions related to read and process raw dm4, dm3 or FEI TIA or Ceta datas.
