README.md
setup.py
src/niiprep/__init__.py
src/niiprep/autocrop.py
src/niiprep/bias_correct.m
src/niiprep/bias_correct_spm.py
src/niiprep/cli.py
src/niiprep/crop.py
src/niiprep/denoise_mp2rage.py
src/niiprep/mask.py
src/niiprep/matlab_denoise.py
src/niiprep/nii2mp4.py
src/niiprep/patchify_nii.py
src/niiprep/registration.py
src/niiprep/resample.py
src/niiprep/round.py
src/niiprep.egg-info/PKG-INFO
src/niiprep.egg-info/SOURCES.txt
src/niiprep.egg-info/dependency_links.txt
src/niiprep.egg-info/entry_points.txt
src/niiprep.egg-info/requires.txt
src/niiprep.egg-info/top_level.txt
src/niiprep/denoise/README.md
src/niiprep/denoise/new_denoising_func_matlab_matrix.m
src/niiprep/denoise/Dmri_LAVI/denoise_with_vst_map.m
src/niiprep/denoise/Dmri_LAVI/homomorphic_gauss_estimation.m
src/niiprep/denoise/Dmri_LAVI/lpf.m
src/niiprep/denoise/Dmri_LAVI/rice_sigma_mapEST.m
src/niiprep/denoise/Dmri_LAVI/riceoptvst/Legal_Notice.txt
src/niiprep/denoise/Dmri_LAVI/riceoptvst/MRI_riceVST_denoising.m
src/niiprep/denoise/Dmri_LAVI/riceoptvst/NonChiVST_EUI.m
src/niiprep/denoise/Dmri_LAVI/riceoptvst/NonChiVST_sigmaEst.m
src/niiprep/denoise/Dmri_LAVI/riceoptvst/README.txt
src/niiprep/denoise/Dmri_LAVI/riceoptvst/Rice_VST_A.mat
src/niiprep/denoise/Dmri_LAVI/riceoptvst/Rice_VST_B.mat
src/niiprep/denoise/Dmri_LAVI/riceoptvst/demo_riceVST_denoising.m
src/niiprep/denoise/Dmri_LAVI/riceoptvst/demo_riceVST_denoising_Tales.m
src/niiprep/denoise/Dmri_LAVI/riceoptvst/demo_riceVST_denoising_edited.m
src/niiprep/denoise/Dmri_LAVI/riceoptvst/function_stdEst.m
src/niiprep/denoise/Dmri_LAVI/riceoptvst/ricePairInversion.m
src/niiprep/denoise/Dmri_LAVI/riceoptvst/riceVST.m
src/niiprep/denoise/Dmri_LAVI/riceoptvst/riceVST_EUI.m
src/niiprep/denoise/Dmri_LAVI/riceoptvst/riceVST_sigmaEst.m
src/niiprep/denoise/Dmri_LAVI/riceoptvst/t1_icbm_normal_1mm_pn0_rf0.rawb
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d/Legal_Notice.txt
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d/README.txt
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d/SheppLogan3D.mat
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d/Transforms.mat
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d/bm4d.m
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d/bm4d_thr_mex.mexa64
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d/bm4d_thr_mex.mexmaci64
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d/bm4d_thr_mex.mexw64
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d/bm4d_wie_mex.mexa64
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d/bm4d_wie_mex.mexmaci64
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d/bm4d_wie_mex.mexw64
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d/demo_denoising.m
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d/demo_reconstruction.m
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d/helper.m
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d/ssim_index3d.m
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d/t1_icbm_normal_1mm_pn0_rf0.rawb
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d_ol/Legal_Notice.txt
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d_ol/README.txt
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d_ol/SheppLogan3D.mat
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d_ol/Transforms.mat
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d_ol/bm4d.m
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d_ol/bm4d_thr_mex.mexa64
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d_ol/bm4d_thr_mex.mexmaci64
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d_ol/bm4d_thr_mex.mexw64
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d_ol/bm4d_wie_mex.mexa64
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d_ol/bm4d_wie_mex.mexmaci64
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d_ol/bm4d_wie_mex.mexw64
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d_ol/demo_denoising.m
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d_ol/demo_reconstruction.m
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d_ol/helper.m
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d_ol/ssim_index3d.m
src/niiprep/denoise/Dmri_LAVI/riceoptvst/bm4d_ol/t1_icbm_normal_1mm_pn0_rf0.rawb
src/niiprep/denoise/RiceOptVST/Legal_Notice.txt
src/niiprep/denoise/RiceOptVST/MRI_riceVST_denoising.m
src/niiprep/denoise/RiceOptVST/README.txt
src/niiprep/denoise/RiceOptVST/Rice_VST_A.mat
src/niiprep/denoise/RiceOptVST/Rice_VST_B.mat
src/niiprep/denoise/RiceOptVST/demo_riceVST_denoising.m
src/niiprep/denoise/RiceOptVST/demo_riceVST_denoising_Tales.m
src/niiprep/denoise/RiceOptVST/function_stdEst.m
src/niiprep/denoise/RiceOptVST/ricePairInversion.m
src/niiprep/denoise/RiceOptVST/riceVST.m
src/niiprep/denoise/RiceOptVST/riceVST_EUI.m
src/niiprep/denoise/RiceOptVST/riceVST_sigmaEst.m
src/niiprep/denoise/RiceOptVST/t1_icbm_normal_1mm_pn0_rf0.rawb
src/niiprep/denoise/RiceOptVST/bm4d/Legal_Notice.txt
src/niiprep/denoise/RiceOptVST/bm4d/README.txt
src/niiprep/denoise/RiceOptVST/bm4d/SheppLogan3D.mat
src/niiprep/denoise/RiceOptVST/bm4d/Transforms.mat
src/niiprep/denoise/RiceOptVST/bm4d/bm4d.m
src/niiprep/denoise/RiceOptVST/bm4d/bm4d_thr_mex.mexa64
src/niiprep/denoise/RiceOptVST/bm4d/bm4d_thr_mex.mexmaci64
src/niiprep/denoise/RiceOptVST/bm4d/bm4d_thr_mex.mexw64
src/niiprep/denoise/RiceOptVST/bm4d/bm4d_wie_mex.mexa64
src/niiprep/denoise/RiceOptVST/bm4d/bm4d_wie_mex.mexmaci64
src/niiprep/denoise/RiceOptVST/bm4d/bm4d_wie_mex.mexw64
src/niiprep/denoise/RiceOptVST/bm4d/demo_denoising.m
src/niiprep/denoise/RiceOptVST/bm4d/demo_reconstruction.m
src/niiprep/denoise/RiceOptVST/bm4d/helper.m
src/niiprep/denoise/RiceOptVST/bm4d/ssim_index3d.m
src/niiprep/denoise/RiceOptVST/bm4d/t1_icbm_normal_1mm_pn0_rf0.rawb