LICENSE.md
README.md
pyproject.toml
src/ecotyper/__init__.py
src/ecotyper/_ckernel.py
src/ecotyper/_nmfk.c
src/ecotyper/api.py
src/ecotyper/builtin.py
src/ecotyper/cli.py
src/ecotyper/discovery_scrna.py
src/ecotyper/discovery_steps.py
src/ecotyper/io.py
src/ecotyper/model.py
src/ecotyper/nmf.py
src/ecotyper/recovery_steps.py
src/ecotyper/rlayout.py
src/ecotyper/validate.py
src/ecotyper/workflows.py
src/ecotyper/rcompat/__init__.py
src/ecotyper/rcompat/_fmt.c
src/ecotyper/rcompat/_ld.c
src/ecotyper/rcompat/_ld.py
src/ecotyper/rcompat/cluster.py
src/ecotyper/rcompat/collate.py
src/ecotyper/rcompat/fma.py
src/ecotyper/rcompat/frame.py
src/ecotyper/rcompat/io.py
src/ecotyper/rcompat/parse.py
src/ecotyper/rcompat/rng.py
src/ecotyper/rcompat/stats.py
src/ecotyper_py.egg-info/PKG-INFO
src/ecotyper_py.egg-info/SOURCES.txt
src/ecotyper_py.egg-info/dependency_links.txt
src/ecotyper_py.egg-info/entry_points.txt
src/ecotyper_py.egg-info/requires.txt
src/ecotyper_py.egg-info/top_level.txt
tests/test_api.py
tests/test_collate.py
tests/test_consensus.py
tests/test_e2e.py
tests/test_fast.py
tests/test_nmf.py
tests/test_rng.py
tests/test_stats.py